| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2106 |
|---|
| Symbol | |
|---|
| ID | 5206775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2628967 |
|---|
| End bp | 2629641 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640600348 |
|---|
| Product | 50S ribosomal protein L25/general stress protein Ctc |
|---|
| Protein accession | YP_001280996 |
|---|
| Protein GI | 148653903 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
|---|
| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000927468 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATA TTTTATACAC GGTAAACGGC ATCACCCGTA CCAACGATCA GCAGGGCAAA
GGTGCGAGCC GCCGCCTGCG TAAGCAAAAT CTTGTACCAG CCATTATCTA TGGTGGTAAC
GAAGAGCCTA CAGCTATCGC TATCAAAAAA AATGAGCTAT GGAAACTTCT TGAAAACGAA
GCTTTCTTCT CAAACATTTT GACCATCAAC CTTGAAGGCG AAGAGCATCT AGCGGTTATT
AAAGACCTAC AGCGCCATCC TTCTAAAGGC TTTGCAATGC ACGCTGACTT CCAGCGCATC
GTTAAAGGTC AGAAGATCAA CATGCAGATT CCATTGCACT TCACAGGTCG TGAAGAAGCG
CCAGGTATCA AAGCAGGCGG TATCTTATCT ACGCTAGTGA CTGACATCGA AATCGTATGT
CTACCTTCTA ACCTACCAGA ATTCCTAGAA GTAGATGTGT CTAACCTAGA AATCGGTGAG
TCTCTACACT TAACAGACAT CAAACTTCCT GAAGGTGTTG TTATCTTCGA ACTTGACGTT
GATGAGCCAG TTGACCGCAC TGTGGTTAAC ATGCAGGCCC CAACTGTTGA AGAAGTTGAC
ACTGATGCTG AAGAAGTTGA CGCAGCTGAC GTTCCAGCTA CCGAACAAGG TAGTGAAGAA
GACAAAGGCG AATAA
|
|---|
| Protein sequence | MSDILYTVNG ITRTNDQQGK GASRRLRKQN LVPAIIYGGN EEPTAIAIKK NELWKLLENE
AFFSNILTIN LEGEEHLAVI KDLQRHPSKG FAMHADFQRI VKGQKINMQI PLHFTGREEA
PGIKAGGILS TLVTDIEIVC LPSNLPEFLE VDVSNLEIGE SLHLTDIKLP EGVVIFELDV
DEPVDRTVVN MQAPTVEEVD TDAEEVDAAD VPATEQGSEE DKGE
|
|---|
| |