| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2100 |
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| Symbol | fadB |
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| ID | 5206032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2619268 |
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| End bp | 2621427 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640600340 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001280990 |
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| Protein GI | 148653897 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.937609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATATC AAGGTAACCG CATTACGGTA TCGCTGTTAG ACGACGGTAT TGCTAACATG
CAATTTAACG CCGAGGGTGA GAGTGTTAAT AAGTTTGATG CCGAAACAAA TAAGCAGTTC
GATGAAGCTG TGAGTGCCTT AGAAAAAGCA GATAATGTAA AAGGTTTAAT TGTTACCTCA
AGTAAAGGCG TCTTTATCGC GGGTGCTGAC ATCACTGAGT TCGTGAGTCA TTTTAATAAA
GAAGCAGCTG AGATTGAAAA GTGGATCGTT GACATCAACG GTGTATTTAA CCGTTTTGAA
GACCTGCCAT TCCCGAAAGT TGCGGCCATT AATGGCGCAG CATTGGGCGG CGGCTGTGAA
ATGACTTTGG TTTGTGAATA CCGTGTGATG GGCGACAAAG CACAAATCGG TCTACCAGAG
ACTCAATTAG GTATCTTCCC AGGCTTTGGT GGTAGCGTAC GCACGCCTCG TGTTATCGGT
ATCGATAATG CAGTAGAGCT GATTGCAACC GGTAAAGCAC AAAAACCTGC TGAAGCGTTG
AAGCTGGGTC TAGTAGATGC TGTGGTAGCA CAAGATGACT TACAAGAAGC GGCCGTGGAT
CTGGTCAAAA AATGTATCGC AGGCGATCTT GATTGGCAGG CCAAACGTGA GGAGAAGCTT
CAGCCGGTTA AACTAAACCA GCTTGAGCAG ACTATGGCAT TTAGCACTGC TAAAGCGGCC
ATCTTTGCCA AAGCCAATCC AAAACAGTAC CCAGCGCCCG CCATTGCGAT CGAAACCATC
GAAAAGCATG TCAATCTAGG CCGTGATGAA GCGATTAAAG TAGAAGCAGC CGGTTTTGCC
AAAGCGGCGA AGACCCCACA AGCAGAAAGC TTAGTGGGTC TGTTCTTAAA TGATCAAACG
GTTAAGAAGC TTGCCAAACA GCACACCAAA AATGCACATG ATATCAATGA AGCGGCGGTA
CTTGGCGCTG GTATCATGGG TGGCGGTATT GCCTATCAAG CGGCTTCAAA AGGCTTGCCA
ATTATCATGA AAGACATCAA GTCTGAGCAA TTAGACTTAG GTATGGGTGA AGCCAGCAAG
CTATTAGGTA AAATGGTTGA GCGTAAGAAA ATGACCCCAG CACAAATGGG TGAAACGCTA
AGCCGTATCC GTCCTACTTT GAATTACGGC GACTTTGGCG AGACTGACAT CGTGATCGAA
GCGGTTGTTG AAAATCCAAA AGTAAAACAC GCGGTATTAA AAGAAGTAGA AGGCTTAGTA
AAAGACAACG CCATTCTTGC CTCTAATACC TCAACCATCT CAATCACCTA CTTAGCCACT
GTGCTTGAGC GCCCAGAGAA CTTCGTGGGT ATGCACTTCT TTAACCCAGT ACACCGCATG
CCGCTAGTGG AAGTTATCCG TGGTGAAAAA TCATCAGAAG AAGCCATTGC AACCACGGTT
GCGTTAGCTC AGCGTATGGG CAAAGTACCT GTTGTGGTCA ATGACTGCCC AGGTTTCTTA
GTCAACCGCG TATTGTTCCC ATACTTCGGT GCGTTTGACC TGCTATTAAA ACAAGGCGCT
GACTTTGTTC ATGTTGATAA AGTTATGGAG AAATTCGGCT GGCCTATGGG TCCTGCCTAT
TTAATCGACG TGGTGGGTCT AGACACTGGC GTACACGGCG CAGAAGTGAT GGCAGAAGGC
TTCCCAGATC GCATGAAGCC AGATTACAAA GGCGCTATCA AGCATCTGTT TGAAAACAAC
CGTCTGGGTC AGAAAAACGG CGTTGGCTTC TATAAATACG AAAAAGACAG CCGTGGTAAG
CCTAAGAAAA CAGCAGACGA CGCCACTTAT GCACTGCTTA AAGACACCAC TGATACAGAT
AATCAGCAGT TCGATGATCA AACCATCATC GATCGTATGA TGCTGGCCTT CTGTAACGAA
ACCGTGCGCT GCTTAGAGGA CAACATTGTT GCGACGCCAA GCGAAGCGGA CATGGCGATG
ATTATGGGTG TGGGCTTCCC TGCATTCCGT GGTGGTCCAT GCCGTTACAT CGACCAAGTT
GGCCTTGATA ACTACTTAGC GCTATGTGAG AAATATGCAC ACCTAGGCAA AGCGTATGAA
GCGCCGCAGA AAATCCGTGA TATGGCAGCG GCTGGCGAGA CATTTTACCC AAAAGCCTAA
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| Protein sequence | MIYQGNRITV SLLDDGIANM QFNAEGESVN KFDAETNKQF DEAVSALEKA DNVKGLIVTS
SKGVFIAGAD ITEFVSHFNK EAAEIEKWIV DINGVFNRFE DLPFPKVAAI NGAALGGGCE
MTLVCEYRVM GDKAQIGLPE TQLGIFPGFG GSVRTPRVIG IDNAVELIAT GKAQKPAEAL
KLGLVDAVVA QDDLQEAAVD LVKKCIAGDL DWQAKREEKL QPVKLNQLEQ TMAFSTAKAA
IFAKANPKQY PAPAIAIETI EKHVNLGRDE AIKVEAAGFA KAAKTPQAES LVGLFLNDQT
VKKLAKQHTK NAHDINEAAV LGAGIMGGGI AYQAASKGLP IIMKDIKSEQ LDLGMGEASK
LLGKMVERKK MTPAQMGETL SRIRPTLNYG DFGETDIVIE AVVENPKVKH AVLKEVEGLV
KDNAILASNT STISITYLAT VLERPENFVG MHFFNPVHRM PLVEVIRGEK SSEEAIATTV
ALAQRMGKVP VVVNDCPGFL VNRVLFPYFG AFDLLLKQGA DFVHVDKVME KFGWPMGPAY
LIDVVGLDTG VHGAEVMAEG FPDRMKPDYK GAIKHLFENN RLGQKNGVGF YKYEKDSRGK
PKKTADDATY ALLKDTTDTD NQQFDDQTII DRMMLAFCNE TVRCLEDNIV ATPSEADMAM
IMGVGFPAFR GGPCRYIDQV GLDNYLALCE KYAHLGKAYE APQKIRDMAA AGETFYPKA
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