| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2048 |
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| Symbol | |
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| ID | 5206121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2553739 |
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| End bp | 2556807 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600288 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001280938 |
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| Protein GI | 148653845 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA AAACCAATAA AGACACTAAC CTCAAAACTG CCGATACCAC AACCGACACC
TCCCATGCGG CATTAGATCC CAATATATTG CCGGATTTCG AGGCCATGCC TAATGTGGCA
CAGATGCCTA CAGATCATAT CGATAAACAG CAGCCACCTT TTGTGCTGGT AGATGGCTCT
TACTATCTGT TTCGCACTTA CCATGCGCTG CCTAAGACCA TGATGACCAC TCAAGGCCTG
ACTACTAATG CCATTCGCGG CACGCTCAAT GCGCTACTCA AAGTAATGCG CCGCTATCAT
CCCACCCATA TGGCCGTATG CTTTGACACT AAGTCACCCA CGTTTCGTCA CACCATGTCA
GAGGAATACA AAGCCAATCG CCCAAAAATG GATCCTGAAT TGGCCGAACA AATCCCTTAT
ATTCACCGTT TGGTACGGGC ACTTGGCATT CCACTGCTGC GTATTGAAGG CGCTGAGGCT
GATGACATTA TCGGTACCCT GACCCACCGC GCTATTGAAG AGGGTCATCA TGTGGTCATC
TCAACCGGTG ATAAAGACAT GATGCAGCTG GTCAACGACT GTGTCATATT GGAGGACAGC
TTCGCCGGCA AAGTGGTCGA TGTGCCAGCG GTTGAAGAAA AATTTGGTAT TAAACCCAAT
CAAATCATTG ACCTACTTAC TCTTATGGGG GATGCTTCTG ACGGCATTAA GGGTATACCT
AGTGTCGGTC AAAAAACCGC AGTTAAATGG CTTAATCAGT ACCAAACCGT AGATAATATC
CTTGCTAATG CTCACAACAT CAAAGGCAAA GTGGGCGAAA AGTTGGTGGA GTTTGTAGAT
AATATTCCCC GTGATCGGCA GCTTGCCACC ATTGTGACCA ACCTAGATAT CGGTCAGGAC
TGGGAAGACC TGCGCATTAA TACCGATAGC AGCACTTTTG TGGCTGAATT GCGAGACTTA
TATAGTGAGC TTGAATTCAA AAATGAATTG GCATCATTGG ATCATCCCAA TCACCCTGCC
AACTCAAGCG TCCATAGTGT GGCTGATAGC AAAGCCGATG CTGAGTCACA AGCACAAGTG
GCAAAAACCC TACAACACCA AAAACAGAGC TCTATTATTG AGCATATCAA AAATAGCAAC
ACGCATGACA AAGCTTGGCA CACCATCCTT GATGAGTCTG CCTTTGATAA TTTACTAAAC
AAACTACAGG CAGCGCCTTA CTTTGCTGTC GATACCGAGA CCACCAGTAT CAACTGGCGT
GAAGCACAGA TCGTGGGCCT GTCCTTTTCT GTGCAAGCGC ATGAGGCTTA TTATTTACCA
CTGGCACATG TGGACTATAA CGAACCGCAA AAAAAGGCGA AGAACAAAAA AGAAGAAGCT
GAACAAGCAA AACTACTTGC AAATGCAACA GTTGATCCGC TAATAGCCAA ACAGCTTGAC
CGTGATACAG TGCTTGCCAA ATTAAAGCCT ATTTTAGAGA ACCCTAACAT TGGCAAAATC
GGTCAACATC TAAAATATGA TGCTCATGTA TTGAGCAAGT ATGGTATCGA GTTAAATATG
TCACCCAAAA ACTGGGAAAT GGATACCATG CTAGCAAGCT ACGTGTTAAA TGCAGCAGCT
ACCCGTCACA GCATGGACGA TCTTGCCCGC CATTATTTGC ATACCCAAAC CATTAGCTTT
GAAGACGTCG CGGGTAAAGG GGCTAAGCAG GTGACCTTTG ATAAAGTCGC TATTAACATT
GCCAGTGACT ATGCGTGTGA AGACGCCGAT ATTACCTATC AATTGTTTGA GCTGTTCCAA
GATAAGCTCA AAGATGACGC GGTCAACCAA CGCCTATTGC ATGAGCTTGA GATTCCTGTG
GCACAGATAT TGTGTCAGAT GGAGTCCGAA GGCATTATGA TCAAACGCTC ATTCTTAAAC
GAGTTGTCTG AGCGCTTTGA TGAAGAGATT GTTGCGCTTG AAAAGCAAGC CTACATTGAA
GCCGGAGAAG CGTTTAACCT AGGCTCACCT AAGCAATTGG GTGAAATGCT GTTTGATAAG
CTTGGCGTTA TTGGCGGTAA AAAAACCAAA TCGGGTCAAT ACTCAACCGG TGAGGCAGTA
TTGTCAAAGA TTGAGCACCC ACTGGCTGAG ATTGCGCTAG AATATCGTAG CTTAGCTAAG
CTCAAAAACA CCTATACCGA TGCACTCGAT GCGGTAGCCG ATAACGATAC TGACCGTGTG
CATACCAGCT ATCATCAAGC CTTAACCAGT ACCGGTCGCC TCTCCTCTAC TGATCCAAAC
TTGCAGAACA TTCCTATTCG CACCAAGACT GGCCGCTTAA TTCGCCAAGC CTTTATCGCA
CCTAAAGGCC GAGTGCTACT GGCGGCGGAC TACTCACAGA TTGAGCTGCG CTTAATGGCA
CATTTCTCAG GTGACGACAA CCTGACTCGC GCCTTTAATG AAGGCTTGGA CATTCATAGT
GCCACAGCAG CTGAGGTGCT TGGTAAATCA GTCGATGATG TTACCCCAAC CGAGCGCCGT
AACGCCAAAG CCATTAACTT TGGTTTGCTC TATGGTATGA GCGCCTTTGG TCTGGCCAAG
CAAATTCAAA TGGGACGCAG TGAAGCACAA GACTATATCA ATCAGTACTT CGCACGTTAT
CCTGGCGTGC AGCGTTATAT GCAAGAGACT CGAAATAGCG CGGTAGACAA TGGCTATATC
GAAACCATCT TAGGGCGTAA GCTTTATACC CCAGACATTC AGCACAGCAA TCAAATGGTA
CGCCGCGGCG CCGAACGTGC TGCCATTAAT GCCCCACTAC AAGGCAGTGC CGCTGATTTA
ATTAAGCTTG CGATGATTGC GGTGGATAAC GTATTGCCCA AACAAAATGC CAAAATGCTA
TTACAGGTGC ATGATGAATT GGTATTTGAG GTGGATGCCG ATAAGGTCGA TCACATTGCT
AAGCTTATTA AAAATGCGAT GCAAAATGTA CTGAGCGATA CCGCTAAGCA GATGGGCTGG
GATGTTGATT TTGCCGTACC ATTATTGGTG GAAACCGGTG TCGGTGATAA CTGGGATGAG
GCGCATTAA
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| Protein sequence | MTDKTNKDTN LKTADTTTDT SHAALDPNIL PDFEAMPNVA QMPTDHIDKQ QPPFVLVDGS
YYLFRTYHAL PKTMMTTQGL TTNAIRGTLN ALLKVMRRYH PTHMAVCFDT KSPTFRHTMS
EEYKANRPKM DPELAEQIPY IHRLVRALGI PLLRIEGAEA DDIIGTLTHR AIEEGHHVVI
STGDKDMMQL VNDCVILEDS FAGKVVDVPA VEEKFGIKPN QIIDLLTLMG DASDGIKGIP
SVGQKTAVKW LNQYQTVDNI LANAHNIKGK VGEKLVEFVD NIPRDRQLAT IVTNLDIGQD
WEDLRINTDS STFVAELRDL YSELEFKNEL ASLDHPNHPA NSSVHSVADS KADAESQAQV
AKTLQHQKQS SIIEHIKNSN THDKAWHTIL DESAFDNLLN KLQAAPYFAV DTETTSINWR
EAQIVGLSFS VQAHEAYYLP LAHVDYNEPQ KKAKNKKEEA EQAKLLANAT VDPLIAKQLD
RDTVLAKLKP ILENPNIGKI GQHLKYDAHV LSKYGIELNM SPKNWEMDTM LASYVLNAAA
TRHSMDDLAR HYLHTQTISF EDVAGKGAKQ VTFDKVAINI ASDYACEDAD ITYQLFELFQ
DKLKDDAVNQ RLLHELEIPV AQILCQMESE GIMIKRSFLN ELSERFDEEI VALEKQAYIE
AGEAFNLGSP KQLGEMLFDK LGVIGGKKTK SGQYSTGEAV LSKIEHPLAE IALEYRSLAK
LKNTYTDALD AVADNDTDRV HTSYHQALTS TGRLSSTDPN LQNIPIRTKT GRLIRQAFIA
PKGRVLLAAD YSQIELRLMA HFSGDDNLTR AFNEGLDIHS ATAAEVLGKS VDDVTPTERR
NAKAINFGLL YGMSAFGLAK QIQMGRSEAQ DYINQYFARY PGVQRYMQET RNSAVDNGYI
ETILGRKLYT PDIQHSNQMV RRGAERAAIN APLQGSAADL IKLAMIAVDN VLPKQNAKML
LQVHDELVFE VDADKVDHIA KLIKNAMQNV LSDTAKQMGW DVDFAVPLLV ETGVGDNWDE
AH
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