Gene PsycPRwf_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2042 
SymbolsecE 
ID5206115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2545516 
End bp2545989 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content42% 
IMG OID640600277 
Productpreprotein translocase subunit SecE 
Protein accessionYP_001280932 
Protein GI148653839 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000127265 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATC AACAAGATAA CCTAGATAGT AAGGTATCTG ACGCTAAGCA GGGCGCTCAT 
AATACGTTAA GAAAATCGCT TAATGGTAAA AGTGCAGTAG AAGTAGCCAA AACACGCTCT
CCAAAAGACA TCATGCTTTG GATTATCGCG TTTGCTGCTC TAATTGGTGC CACGCTAGTT
AATTATAAGC TGCCTGGTAT TTGGCAGCCT GCTAACGATA TTTGGGTTCG TGTTGGTATT
ATCGCCTCAC TGATTGTGTT GGCCATTATT TGTTTGGCAC TGACCAATCA AGGACGCAGC
TTTAAGGTAT TGCTTAAAGA CGCCAGCATA GAGTTACGCC GTGTTACCTG GCCAAGTAAG
AATGAAACCA TTCAGTATAC TTGGCAGTCT TTATTGGTAA TCGGTATCGT AGCCGTTATT
GTGTGGTTAC TTGATAACCT ATTTAACTGG TTGGTTGGTA TCTTTATCGG TTAA
 
Protein sequence
MSNQQDNLDS KVSDAKQGAH NTLRKSLNGK SAVEVAKTRS PKDIMLWIIA FAALIGATLV 
NYKLPGIWQP ANDIWVRVGI IASLIVLAII CLALTNQGRS FKVLLKDASI ELRRVTWPSK
NETIQYTWQS LLVIGIVAVI VWLLDNLFNW LVGIFIG