Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_2042 |
Symbol | secE |
ID | 5206115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2545516 |
End bp | 2545989 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640600277 |
Product | preprotein translocase subunit SecE |
Protein accession | YP_001280932 |
Protein GI | 148653839 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0690] Preprotein translocase subunit SecE |
TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000127265 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATC AACAAGATAA CCTAGATAGT AAGGTATCTG ACGCTAAGCA GGGCGCTCAT AATACGTTAA GAAAATCGCT TAATGGTAAA AGTGCAGTAG AAGTAGCCAA AACACGCTCT CCAAAAGACA TCATGCTTTG GATTATCGCG TTTGCTGCTC TAATTGGTGC CACGCTAGTT AATTATAAGC TGCCTGGTAT TTGGCAGCCT GCTAACGATA TTTGGGTTCG TGTTGGTATT ATCGCCTCAC TGATTGTGTT GGCCATTATT TGTTTGGCAC TGACCAATCA AGGACGCAGC TTTAAGGTAT TGCTTAAAGA CGCCAGCATA GAGTTACGCC GTGTTACCTG GCCAAGTAAG AATGAAACCA TTCAGTATAC TTGGCAGTCT TTATTGGTAA TCGGTATCGT AGCCGTTATT GTGTGGTTAC TTGATAACCT ATTTAACTGG TTGGTTGGTA TCTTTATCGG TTAA
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Protein sequence | MSNQQDNLDS KVSDAKQGAH NTLRKSLNGK SAVEVAKTRS PKDIMLWIIA FAALIGATLV NYKLPGIWQP ANDIWVRVGI IASLIVLAII CLALTNQGRS FKVLLKDASI ELRRVTWPSK NETIQYTWQS LLVIGIVAVI VWLLDNLFNW LVGIFIG
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