Gene PsycPRwf_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2008 
Symbol 
ID5206679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2498235 
End bp2500688 
Gene Length2454 bp 
Protein Length817 aa 
Translation table11 
GC content49% 
IMG OID640600240 
Producthypothetical protein 
Protein accessionYP_001280898 
Protein GI148653805 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0530056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.455739 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTG AAACCATCGC CCGCACCGCT TTTAAACAAG GTATTACGCC TTTATACGAC 
TATGATAAGC ACTGGGCCAG TTGCTATGAG CCTGCCCCCT TCCTACCCAT GAGCCGTGCT
GAGATGGACG AGCTGGGCTG GGATGCTTGT GATGTGATCA TCATCTCAGG TGATGCTTAT
GTCGATCATC CAAGCTTTGG CATGGCGATT ATTGGCCGCT TGTTAGAAGC GCAAGGCTTT
CGTGTGGGCA TCATTGCACA GCCTGATTGG ACCAGCAAAG ATGCCTTTAT GGCGCTTGGC
AAGCCAGTTT ATGCTTATGG TGTAACTGCT GGCAATATGG ACAGCATGAT TAACCGCTAT
ACCGCCGATC GCCGTATTCG CAGTGATGAT GCTTATTCAC CGGACAATGC ACCAGACAAG
CGCCCTGATC GCGCGGCCAT TGTTTATAGC CAGCGCTGCC GCGAGGCTTA TCCTGATGTG
CCGATTATTT TGGGTGGTAT TGAGGGCAGT TTGCGCCGTA TTGCCCATTA CGATTATTGG
TCAGATAAAG TGCGCCGCAG TGTGCTACTA GACAGCCGCG CTGATGTGCT GCTATACGGT
AATGCCGAGC GTGCCATTGT CGATATCGTG CATGGTCTGT CAAAGGGTTA TACCTTCGAG
CAGATGAGCG ATTTACGAGG GACGGCTTAT CTATTGACAC CATCACGCCG CCACTGGAAA
GCGGACATGA TTGAGGTGGC CAGTAATGAT GTGGATACCA TTGGCCGTGT CGACCCCATT
ATCAACCCTT ATGTGATGAC TGAGGATTTA GACAGCTGCT CGATTGAAAA AGAAAAAGGC
AACTCTGAGC GTAAGGTGAA TGAAAGCCTA TCCTCAATGG AACGTCAATA CAAAGGCTTT
GTCGCTGAAA AAGTGGATAA CAAAGTCCTA AATGCCGATC AGGTTAATGA AGATGTACAA
GTCGTTAAAA TGGTCGGTCT TGAAGCAGAT AAGCCAAAAA CTGCCCGTAA GCACAAACTA
AAGCTGCCAC CACGCGAAAA GACGGTGATT CGCCTGCCCG ATTATGAGCA AGTAAAATCA
GATCCAGTGT TGTATGCCCA TGCCAACCGC ATTCTGCATT TAGAGACCAA CCCAGGTAAC
GCCCGCGCCT TAGTACAGCG TCATGGCACC GGCGGTGGCA ATTCAAGAAC CGACATTGAT
GTGTGGTTAA ACCCGCCACC GATTCCCTTA TCTATGGAGG AGATGGATTA CGTCTTTGAT
TTGCCTTATG CGCGTGTGCC ACATCCCAGC TATGGTAAAG CACGTATTCC AGCTTTTGAC
ATGATTAAGT TTTCGGTCAA TATCATGCGT GGCTGCTTTG GTGGCTGTAC TTTTTGTTCT
ATTACTGAGC ACGAAGGTCG TATTATTCAG AACCGCTCTG AAGAGTCGAT TTTACGTGAA
GTGGAAGCCA TTCGTGATAC CGCACCTAAT TTTACCGGCG TGATTTCAGA TTTAGGTGGC
CCAACTGCCA ATATGTACCG ACTCAGCTGT AAAGATGAGG CCATCGAGAA GAACTGCCGT
AAACCTTCTT GTGTGTACCC TGATATTTGT GACAACTTAT TGACCGATCA CAGCAACTTA
ACCAAGCTGT ATCGTAAGGC TCGTGATATC AAGGGCATTA AGAAGATTCT CATCGCTTCA
GGTCTACGCT ACGATTTGGC GGTCAAAGAC CCTGAATACG TCAAAGAACT GGTCACCCAC
CACGTCGGTG GTTATCTAAA AATTGCTCCT GAGCATTCTG AAACCAACGT TTTATCGAAG
ATGATGAAGC CGGGTATGGG CTCCTATGAC ACCTTCAAAC AAATGTTTGA GCAGTACAGT
CAGGAGGCCG GTAAAGAGCA GTATTTAATC CCCTATTTCA TCGCCGCGCA CCCTGGTACA
ACAGATGAAG ACATGATGAA TTTGGCATTG TGGCTCAAGC GCAATGACTT TAGAACCGAC
CAAGTTCAGG CTTTCTACCC AAGCCCTATG GCAACTGCGA CCACCATGTA TCACACTCAT
AAAGACCCGC TGCATAAAGT GACTCGTGAA GGCGGTGATG TGGATATCGT TAAATCTGGC
AAGCAGCGCA AATTGCACAA GGCCTTTTTA CGTTATCATG ATCCAAAAAA CTGGGCAATG
CTACGCGCAG CCTTAAAACG TATGGGCCGC GAGGACTTAA TTGGTACCGC TCGTCATTGC
TTGATTCCAC CGTTTAACTC ACGCTTAGAG GGCAAAGACA GCCAAGACAC TTATCAATCG
GCCCGTAAAA AGAACAGCCG TGTGGGCTCA GACTCCATCA AGCGCTCAAA TGCTAATAAG
CGCAGTACCG GCGCCGCCAC TGCAGGCAAG CTGGGCCGAA ATCCAAGCAA ACAGGTCAAA
AAAGGCAACT TTCAAACCCA GCATACCGGA TTGCCGCCAC GCGCGACCAA ATAG
 
Protein sequence
MSAETIARTA FKQGITPLYD YDKHWASCYE PAPFLPMSRA EMDELGWDAC DVIIISGDAY 
VDHPSFGMAI IGRLLEAQGF RVGIIAQPDW TSKDAFMALG KPVYAYGVTA GNMDSMINRY
TADRRIRSDD AYSPDNAPDK RPDRAAIVYS QRCREAYPDV PIILGGIEGS LRRIAHYDYW
SDKVRRSVLL DSRADVLLYG NAERAIVDIV HGLSKGYTFE QMSDLRGTAY LLTPSRRHWK
ADMIEVASND VDTIGRVDPI INPYVMTEDL DSCSIEKEKG NSERKVNESL SSMERQYKGF
VAEKVDNKVL NADQVNEDVQ VVKMVGLEAD KPKTARKHKL KLPPREKTVI RLPDYEQVKS
DPVLYAHANR ILHLETNPGN ARALVQRHGT GGGNSRTDID VWLNPPPIPL SMEEMDYVFD
LPYARVPHPS YGKARIPAFD MIKFSVNIMR GCFGGCTFCS ITEHEGRIIQ NRSEESILRE
VEAIRDTAPN FTGVISDLGG PTANMYRLSC KDEAIEKNCR KPSCVYPDIC DNLLTDHSNL
TKLYRKARDI KGIKKILIAS GLRYDLAVKD PEYVKELVTH HVGGYLKIAP EHSETNVLSK
MMKPGMGSYD TFKQMFEQYS QEAGKEQYLI PYFIAAHPGT TDEDMMNLAL WLKRNDFRTD
QVQAFYPSPM ATATTMYHTH KDPLHKVTRE GGDVDIVKSG KQRKLHKAFL RYHDPKNWAM
LRAALKRMGR EDLIGTARHC LIPPFNSRLE GKDSQDTYQS ARKKNSRVGS DSIKRSNANK
RSTGAATAGK LGRNPSKQVK KGNFQTQHTG LPPRATK