Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1996 |
Symbol | |
ID | 5204810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2486375 |
End bp | 2488126 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640600228 |
Product | hypothetical protein |
Protein accession | YP_001280886 |
Protein GI | 148653793 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0038459 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAATG TGTTTAATCT TAGTAAACGA CTTTTAGAAC TTATTAATAA TGAAGATAAT TTTGCTATCG CCTTAGTAGG TGAATGGGGT ATCGGTAAGA CACATTTCTG GAATGAGTTC TATAAGGAGA ATCACTTATC TTTTAAAACA AAAAAATACG CATATGTTTC CCTATTTGGT ATCGACTCAT TAGAGTCTCT AAAGTTTGAA ATAGCTCTAA AAACTCACAA TACTGGACAA GAAAAGGATA ATTTATCTTA TTTAAAGACT GGTTTTAAAA AAGTACTAGA AAACGTTAAC TTTTCTGATA TAGAGGGTTC AGGGGTTACT CTATCTGTCA GTAAAGGAGT AATTAGTAGC ACTTTATCTA GTATGGTTAA TGATACTGTA ATCTGTATCG ATGATATCGA GAGACTTTCA GATAAATTAG ATATTAAAGA CGTGATGGGA CTAATCAACC ATCTAAACTT GGAAAAGAAC TGTAAAATCA TCGTTCTGCT AGATCAAGCA AAAGCTAAAG AGCAGTTTAT AGAATACAAA GAAAAGGTTT TTGATGATGT TTTAGTACTA GATGAGTCTT TATCTGTAAT ACAGAAAATT GTCGATGACA AAATGTTTGA TGTCTACAAG GATTTCTACA CAACAACTGG GGTCAAGAAC TTACGGTTTT ACCAAAGAGT CAATAAAATT TATACACTTT TTATCAAGTC ATTCTCTAAT CTATCAGAAA CAAGTAATAA GCAAATATTA AGCTTTATTC TGGTTATAAG AATGCTATAC GACATGCCTC ATATGATAGA CGAAAATATA GACTTTAATT TTTTTATTGA AAGCTTTGAC TCAAAACATA TTCGTAATTT TAGAGGCTAT CAGCTTAGAA GTGCATACAA ACAAGAAGAC ATAACTCCAG ACCATATAGT TAAATTTAAT AAAATAAACA ACTTTATCAA CCCATTCTAC AGCTATTTCG AAATCTCAAG TTGGGGTGAG GCTGTTGTCA ATTGGCTTTT AAATTTAGAA CTTGATGAGA ATTTAACAAA AGAACTTCTA GAAAGAGATT TAGTAACTGA AGAAACTTTA ATGTCTGACA GATTAAGTTC AGAGTTACTG GCTGAGTTTC ATAATATGGA GATAGGCCCT AACTTTGCAG CACGTTTATA CTATATGGCC TGTGCCAAAA TCGGATCAGC TCAGCTGAAC AATCTAAGTT TTTATTGCGA TATATTGGAA TCCTGTGGCG AATTAAATTT AGCTATTCAG CTAGAGAATC ACATTAAACA ATATATTAAC ACTACAATAA CTGCTCAAGA GAACTCTGTT TTTATTGGTG ATTTCTATTT TTTAGGTAAA GAGCCTAATG ACCGTTTTTA TGATTATGTC ACTGAGAAAA TAGAAGAAGA TCGAACACAG AATGTAAACC CTAGTACTAT TTTATCAATA TTTAACAAGT ATCATGAAAG CAATCGCAGT GCATACAACA CTACCGACAA TCAATCTATT AGACTTATTG ATAAAAATAT TTTAAGAGAT ATCATTTGGT CTGATATCAG TACAAGAGCA GGATATCGAA AGCAATTCGT TCATTCTATT CTCTTATATC CACCTTTAAA TGAAATTGAA GGAAAAGCTG AAGAAGTTCG AAAGTGGATA CTAGAATTAC TTGATGAAAA AATTAAAGCT AATCCTAATA GCGAACCCTC TATAAGAATG TGGTTAGAAG ACACCAATAA TTTAACAAAA AATCTGAGAT GA
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Protein sequence | MANVFNLSKR LLELINNEDN FAIALVGEWG IGKTHFWNEF YKENHLSFKT KKYAYVSLFG IDSLESLKFE IALKTHNTGQ EKDNLSYLKT GFKKVLENVN FSDIEGSGVT LSVSKGVISS TLSSMVNDTV ICIDDIERLS DKLDIKDVMG LINHLNLEKN CKIIVLLDQA KAKEQFIEYK EKVFDDVLVL DESLSVIQKI VDDKMFDVYK DFYTTTGVKN LRFYQRVNKI YTLFIKSFSN LSETSNKQIL SFILVIRMLY DMPHMIDENI DFNFFIESFD SKHIRNFRGY QLRSAYKQED ITPDHIVKFN KINNFINPFY SYFEISSWGE AVVNWLLNLE LDENLTKELL ERDLVTEETL MSDRLSSELL AEFHNMEIGP NFAARLYYMA CAKIGSAQLN NLSFYCDILE SCGELNLAIQ LENHIKQYIN TTITAQENSV FIGDFYFLGK EPNDRFYDYV TEKIEEDRTQ NVNPSTILSI FNKYHESNRS AYNTTDNQSI RLIDKNILRD IIWSDISTRA GYRKQFVHSI LLYPPLNEIE GKAEEVRKWI LELLDEKIKA NPNSEPSIRM WLEDTNNLTK NLR
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