Gene PsycPRwf_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1996 
Symbol 
ID5204810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2486375 
End bp2488126 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content31% 
IMG OID640600228 
Producthypothetical protein 
Protein accessionYP_001280886 
Protein GI148653793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0038459 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAATG TGTTTAATCT TAGTAAACGA CTTTTAGAAC TTATTAATAA TGAAGATAAT 
TTTGCTATCG CCTTAGTAGG TGAATGGGGT ATCGGTAAGA CACATTTCTG GAATGAGTTC
TATAAGGAGA ATCACTTATC TTTTAAAACA AAAAAATACG CATATGTTTC CCTATTTGGT
ATCGACTCAT TAGAGTCTCT AAAGTTTGAA ATAGCTCTAA AAACTCACAA TACTGGACAA
GAAAAGGATA ATTTATCTTA TTTAAAGACT GGTTTTAAAA AAGTACTAGA AAACGTTAAC
TTTTCTGATA TAGAGGGTTC AGGGGTTACT CTATCTGTCA GTAAAGGAGT AATTAGTAGC
ACTTTATCTA GTATGGTTAA TGATACTGTA ATCTGTATCG ATGATATCGA GAGACTTTCA
GATAAATTAG ATATTAAAGA CGTGATGGGA CTAATCAACC ATCTAAACTT GGAAAAGAAC
TGTAAAATCA TCGTTCTGCT AGATCAAGCA AAAGCTAAAG AGCAGTTTAT AGAATACAAA
GAAAAGGTTT TTGATGATGT TTTAGTACTA GATGAGTCTT TATCTGTAAT ACAGAAAATT
GTCGATGACA AAATGTTTGA TGTCTACAAG GATTTCTACA CAACAACTGG GGTCAAGAAC
TTACGGTTTT ACCAAAGAGT CAATAAAATT TATACACTTT TTATCAAGTC ATTCTCTAAT
CTATCAGAAA CAAGTAATAA GCAAATATTA AGCTTTATTC TGGTTATAAG AATGCTATAC
GACATGCCTC ATATGATAGA CGAAAATATA GACTTTAATT TTTTTATTGA AAGCTTTGAC
TCAAAACATA TTCGTAATTT TAGAGGCTAT CAGCTTAGAA GTGCATACAA ACAAGAAGAC
ATAACTCCAG ACCATATAGT TAAATTTAAT AAAATAAACA ACTTTATCAA CCCATTCTAC
AGCTATTTCG AAATCTCAAG TTGGGGTGAG GCTGTTGTCA ATTGGCTTTT AAATTTAGAA
CTTGATGAGA ATTTAACAAA AGAACTTCTA GAAAGAGATT TAGTAACTGA AGAAACTTTA
ATGTCTGACA GATTAAGTTC AGAGTTACTG GCTGAGTTTC ATAATATGGA GATAGGCCCT
AACTTTGCAG CACGTTTATA CTATATGGCC TGTGCCAAAA TCGGATCAGC TCAGCTGAAC
AATCTAAGTT TTTATTGCGA TATATTGGAA TCCTGTGGCG AATTAAATTT AGCTATTCAG
CTAGAGAATC ACATTAAACA ATATATTAAC ACTACAATAA CTGCTCAAGA GAACTCTGTT
TTTATTGGTG ATTTCTATTT TTTAGGTAAA GAGCCTAATG ACCGTTTTTA TGATTATGTC
ACTGAGAAAA TAGAAGAAGA TCGAACACAG AATGTAAACC CTAGTACTAT TTTATCAATA
TTTAACAAGT ATCATGAAAG CAATCGCAGT GCATACAACA CTACCGACAA TCAATCTATT
AGACTTATTG ATAAAAATAT TTTAAGAGAT ATCATTTGGT CTGATATCAG TACAAGAGCA
GGATATCGAA AGCAATTCGT TCATTCTATT CTCTTATATC CACCTTTAAA TGAAATTGAA
GGAAAAGCTG AAGAAGTTCG AAAGTGGATA CTAGAATTAC TTGATGAAAA AATTAAAGCT
AATCCTAATA GCGAACCCTC TATAAGAATG TGGTTAGAAG ACACCAATAA TTTAACAAAA
AATCTGAGAT GA
 
Protein sequence
MANVFNLSKR LLELINNEDN FAIALVGEWG IGKTHFWNEF YKENHLSFKT KKYAYVSLFG 
IDSLESLKFE IALKTHNTGQ EKDNLSYLKT GFKKVLENVN FSDIEGSGVT LSVSKGVISS
TLSSMVNDTV ICIDDIERLS DKLDIKDVMG LINHLNLEKN CKIIVLLDQA KAKEQFIEYK
EKVFDDVLVL DESLSVIQKI VDDKMFDVYK DFYTTTGVKN LRFYQRVNKI YTLFIKSFSN
LSETSNKQIL SFILVIRMLY DMPHMIDENI DFNFFIESFD SKHIRNFRGY QLRSAYKQED
ITPDHIVKFN KINNFINPFY SYFEISSWGE AVVNWLLNLE LDENLTKELL ERDLVTEETL
MSDRLSSELL AEFHNMEIGP NFAARLYYMA CAKIGSAQLN NLSFYCDILE SCGELNLAIQ
LENHIKQYIN TTITAQENSV FIGDFYFLGK EPNDRFYDYV TEKIEEDRTQ NVNPSTILSI
FNKYHESNRS AYNTTDNQSI RLIDKNILRD IIWSDISTRA GYRKQFVHSI LLYPPLNEIE
GKAEEVRKWI LELLDEKIKA NPNSEPSIRM WLEDTNNLTK NLR