| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1993 |
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| Symbol | |
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| ID | 5205947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2481374 |
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| End bp | 2482738 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640600225 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001280883 |
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| Protein GI | 148653790 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000256386 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000979309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATAGCA TCGAGAAGCG AGCCATTGCC GGTATAGGTG GTATCTTTGC ACTGCGTATG
ATCGGCCTAT TTATGATAGT GCCGGTCTTT TCGGTTTATG GTAACAATTA TGCCCATGCC
ACACCCTTAT TAATTGGTTT GGCTGTCGGT ATTTATGGGT TGGGGCAGGC CCTATTCCAA
ATCCCTATGA GTATGGCAGC GGATAAATTT CCGCGCAAGC CGATGATATT TTTAGGGCTA
TTATTATTTG CCATCGGCGG TGTGGTCGCT GCGACTGCCA CTGATATTTA TCAAGTCATT
ATCGGTCGGG CGCTGGCAGG TAGTGGTGCA GTCTCGGCAA TTCTTATGGC ATTATTGGCC
GATGTAACCC GTGAGCAGCA GCGTACCAAG GCTATGGCCA CTATGGGACT GACCATTGCG
ACTTCTATTA TGCTGTCGTT TGCCATTGGA CCGATGATGG TAGCCAGCCT AGGTATCTCT
GGGCTATTTT GGCTGACCGC AGTATTTGCG CTGGTTGCTA TGCTGCTGTT ATTGTTTGTG
CCTACCCCGC TTAGAGTACT GCGACACAAT CTGGCCAATC AATCGATAGG GGAGCAGCTA
AAAGAGGTGC TGCGTATTGG CGATTTAAAC CGGCTGCATA TCGGTATCTT TGCACTGCAT
TTAACCATGA CTGCCATCTT TGTGATTGTG CCTCAGCAGT TGGCAGACGT GCTAGATTTG
AGTGTGCGTC AACAGGGTAT GGTGTATTTG CCGCTGCTGT TTATTGGCTT TGCCATTGCC
ATTCCCTTTA TCATTATTGC CGAAAAAAAA CGCAAAATGC GTCAGATATT CTTAGCGGCA
TTAACTGTGT TGGTCGCAGC GTTTGTCTGT CTGGCGCTAG GCAGTAAGTT AAGCTATGTA
TTACTGTTTG GGCTCGGTCT TTACTTTATC GGTTTTAACT TACTTGAGGC GACGATTCCC
TCTTGGATTT CTAAAAAGGC ACCTGTGGCC AATAAAGCGA CGGCGATGGG TATTAACTCC
TCCAGCCAGT TTTTAGGAGC CTTCTTCGGT GGGGCCTTGG GCGGTATGTT ACTTAGCCAA
GGTCCGATGC TGGCCTGGGG GCTGCTCGGT GCAGTAATGG CTGTGGCGTT GGTCTTAATT
CTACCGATTT CGCAGCCCCC TTACTTAACC AGTACCACGT TAGCGATCCC CAAACAGGTA
GATGTCACGG CGTGGTCACA GCAAGTTATG TCAGTCGGTG GGGTGGATGA AGTGGTGGTT
ATGCCCAAAG ATGGGGTGGC TTATTTAAAA CTTGATAAGC AAAAAATCGA TGATTATTCA
CGACAGTTAC TGTCGCAACT TACCGAAACT AAGCTAGATA TTTAG
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| Protein sequence | MNSIEKRAIA GIGGIFALRM IGLFMIVPVF SVYGNNYAHA TPLLIGLAVG IYGLGQALFQ
IPMSMAADKF PRKPMIFLGL LLFAIGGVVA ATATDIYQVI IGRALAGSGA VSAILMALLA
DVTREQQRTK AMATMGLTIA TSIMLSFAIG PMMVASLGIS GLFWLTAVFA LVAMLLLLFV
PTPLRVLRHN LANQSIGEQL KEVLRIGDLN RLHIGIFALH LTMTAIFVIV PQQLADVLDL
SVRQQGMVYL PLLFIGFAIA IPFIIIAEKK RKMRQIFLAA LTVLVAAFVC LALGSKLSYV
LLFGLGLYFI GFNLLEATIP SWISKKAPVA NKATAMGINS SSQFLGAFFG GALGGMLLSQ
GPMLAWGLLG AVMAVALVLI LPISQPPYLT STTLAIPKQV DVTAWSQQVM SVGGVDEVVV
MPKDGVAYLK LDKQKIDDYS RQLLSQLTET KLDI
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