| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1991 |
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| Symbol | |
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| ID | 5205945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2479369 |
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| End bp | 2480259 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640600223 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001280881 |
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| Protein GI | 148653788 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.126048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000779322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGACAGATA AGCCGATAGA TTACGCGTTA ATAGATACTC ACACTCATTT TGATGACTTT
GTGTTTGATG AAGATAGGCT GAGCTTGGCA ACTGCAGCTT ATGGGTCTGG GCTACGTCAT
TTATTACTCA TTGGTTATCT GGCCAAATAT TTTGAGCGCA TGCGGCAGAC TCAGCAGCAG
CTATCAAGCT ATTCACATAA CACACAAGCC AATAAGGCCG CAGTACCCAA GGTCTATCTT
GCCTCAGGGC TACATCCTGC TTATATCTTT GAGCATACTG AAGCGGATTT AGACTGTCTG
GCTCAATTTT TACAACGCCA TCCTCATGTT GCTATCGGTG AGATTGGTCT GGATACCTTT
AGCGATGAAT TAAAAACAGA TGAGTCGTTA AAAAAACAAA AACGCTTCTT TAGCGCTCAA
TTGGATTTGG CCGTTGAGCA TCAGTTGCCG GTGTTGCTGC ATATTCGTAA GGCTCATGCT
GAATGCTTGG CGCTATTAAA ACAGCACCAG TATAAAGCCA CTGAACTTGG CGGTATCGCC
CACAGTTTTA GTGGAGGTGA GCAAGAAGCC AAAGCCTTTG TTAAGCTAGG TTTTAAGATT
GGTGTTACCG GGCAGATTAC CAATACCAAT GCCAAAAAAC TACGCCGAGC CATTACTGCC
GTGGTAGAGG AGTTTGGCCT ACAGAGCTTG GTATTAGAGA CAGATTGTCC GGACATGACG
CCTGTGTGCT GTCAGCAAGG AAGTACGCCT ACCCGAAATG TGCCAGGTAA TTTAGGCTTT
GTGCTACAAG GGTTGAGTGA GCTTCTTCAC GTGGATAAGG CCACCTTAGC ACAGCAGCTG
TGGCAAAACA GTTGTGAGGC GTTAAAAGTG GATTGGCCTT ATCCCGCCTA A
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| Protein sequence | MTDKPIDYAL IDTHTHFDDF VFDEDRLSLA TAAYGSGLRH LLLIGYLAKY FERMRQTQQQ
LSSYSHNTQA NKAAVPKVYL ASGLHPAYIF EHTEADLDCL AQFLQRHPHV AIGEIGLDTF
SDELKTDESL KKQKRFFSAQ LDLAVEHQLP VLLHIRKAHA ECLALLKQHQ YKATELGGIA
HSFSGGEQEA KAFVKLGFKI GVTGQITNTN AKKLRRAITA VVEEFGLQSL VLETDCPDMT
PVCCQQGSTP TRNVPGNLGF VLQGLSELLH VDKATLAQQL WQNSCEALKV DWPYPA
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