| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1989 |
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| Symbol | |
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| ID | 5205943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2476196 |
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| End bp | 2478415 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640600221 |
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| Product | hypothetical protein |
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| Protein accession | YP_001280879 |
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| Protein GI | 148653786 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000136918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGATAAGG TCACCCCTGC CAAGCTGTCT TGGCGTGAAG ATGAACTCGG TAACGTGGTC
CCCGTCTCTG AGATATTCGG CGATGTGTAT TACTCTTTGG TCGATGGATT AAATGAGTCG
CGTTATGTAT TTTTGACCCA AAATAAATTA CCTGAGCGCT TTGAAGCCTT ATTTAGCCGA
GCGAATAGTA GCGCAGCGTC TAACTTTAGC ATTGCTGAAT TAGGCTTTGG TACCGGTCTT
AATATACTGG CCACTTGGCA GCTTTGGGAA CACAGTAAGC AGCAGTTCCA TACTTATTTC
AACTCACAAA CTAACCTGCA AACGAGCTCG CAAGATCATT TAAAGGGCTC ACGCTCGCTA
ACACCGCGGC TGCATATTAT CAGTACCGAA AAGCATCCGC TCACTCATGC CGATTTAAGC
CGCAGTCTTG AAAGCTGGAA GCATAAAGAC ACCAGTCTGG TGCCCTTTGT CGATCAGCTA
CTCGCCTTAT ATCCCACCTT GATATCTGGC TGTCATCGCC TACAGTTGGC CGAAGATGTC
ACGTTAGATT TATGGCTTGG TGATGCCTGT TTCAGCTTAC AACAATTGGC CAATAGCTAT
GACACGCTGC CCTACGGCGC TCACATTGAT GCTTGGTACT TAGATGGCTT TGCGCCTGCA
TGTAATGAGT CACTTTGGGC AGATCAGATC TTTGAGCAGG TAAAGCGCTT ATCTAAGCCT
GGTACTACTG CGGCGACCTT TAGCAGTGCT GGCGTGGTCA AACGCGGCTT GATGGCGGCT
GGCTTTGAGA TCAAAAAAAC CAAAGGCTTT GGACGCAAAC GTGAAATGCT AACCGCCACC
AAGCTTGAGC CGGTAGCAGT CAGTGACGAT ACCAGTGACA ACCAAGGTGC TACTGAGTAT
GATGCCAAGT CAACTTTAGC ATTACGCTCT AAGGAGCAAG TCACACTGGA TACACATGCC
GTGACGCCCA ACGAGCAGAT TGCAGTGATT GGTGCAGGTG TTTGTGGATT AATGGCGGCT
TGGTCATTGG CGCAGCGTGG TAATGCGGTG AGCTTAATAG ACAAAGAGGC CCCGCTAGCG
GGTGCCTCTG GCAACCCAAG GGCGCTGCTT GCTCCTAAGA TGACGCCGCT TGCTCATGTG
GCTGAGCATT TGCACAGCAT CAGCTACCTT TATAGCCAAC GCTTTTATCG TCAAATCGAT
CAAGGTGAGC ATAAAATATT TACCCCCACC ACCACCTTAG ACTTGCTACA AAAAAGCAAC
GTCGATGTGC ACCAAATCGC TGAATATCCT GAGCAAATGG CCACCACCTT ATCACTTGAT
AGCGCCCGAG ATATATCTGG TTTACAGCAG CAGGATTTGA CAGCGAATTT ATACCTGCCT
CAATCAGGGC TTATTAACCC TAAGGCACTG GCCGATAAGG TACTTACCCA CCCAAATATC
AGCTTTAAAC AAGCGAACAT TAAGCGCATT ACCCCCTTAC AGGCAGAGGC TTTTGATGAC
GTAACTGAAG TAAGTGAAGT AATTGAAGTC ACTGCGGATA TAACGGTGCA GCCTGCTAAG
CGTACTAAAG TTATGCTGCA CTGCGAAAGT GGAGAGGTGT TGTCGGTCAA TAGAGTGGTT
ATTGCTGCCG CTTTTGAAAG TCAAAGCTTG GATGCGCGCA TTTTTGAGTT TCGTAAAATT
CGGGGTCAAT TATCATGGTT TGAGCCCACT ACCGAGCAGC TGCAAGCACT GCCAACCTTA
CCACTAAAAT ACTCAGGCTA CTGCGCCCCT TTTATACCGC AGCCCGGTGA TGAAGCCGTT
AACTCAGTCA CGCCCTCTGT GCCTACTTTT TTGCTTGGGG CGAGCTTTAT TCGCAATGAT
TTGGATGATG AAATTCGGCT TAGTGAGCAT GCGATTAACC ATCAAAAGCT ACTAACGGCG
CTGCCTGAGC TTTCGGCGGT TCTGCCTTTA CCGGATACAG AGGCTGACTT ATATCAGCGA
TGGCAGGCAC GAGTGGGTAT TCGATCACAG ACGCCAGATT ATCACCCTTT GGTGGGTGCA
GTCGATGAGC AGGGTCTGAT TTGGACACTG AGCGGCATGG GCTCTAAGGG CTATGCTTTT
GCACCGCTAT GTGCTCAGGT ATTAGCTGAT ATGATGACCG CACAGTTTGT ACCGCTGCCG
GCGGCGCTGC TCGCTAAGCT ATCAGTGCAT CGAAGCAGTT TAAAAAAGCC GTTATCATAA
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| Protein sequence | MDKVTPAKLS WREDELGNVV PVSEIFGDVY YSLVDGLNES RYVFLTQNKL PERFEALFSR
ANSSAASNFS IAELGFGTGL NILATWQLWE HSKQQFHTYF NSQTNLQTSS QDHLKGSRSL
TPRLHIISTE KHPLTHADLS RSLESWKHKD TSLVPFVDQL LALYPTLISG CHRLQLAEDV
TLDLWLGDAC FSLQQLANSY DTLPYGAHID AWYLDGFAPA CNESLWADQI FEQVKRLSKP
GTTAATFSSA GVVKRGLMAA GFEIKKTKGF GRKREMLTAT KLEPVAVSDD TSDNQGATEY
DAKSTLALRS KEQVTLDTHA VTPNEQIAVI GAGVCGLMAA WSLAQRGNAV SLIDKEAPLA
GASGNPRALL APKMTPLAHV AEHLHSISYL YSQRFYRQID QGEHKIFTPT TTLDLLQKSN
VDVHQIAEYP EQMATTLSLD SARDISGLQQ QDLTANLYLP QSGLINPKAL ADKVLTHPNI
SFKQANIKRI TPLQAEAFDD VTEVSEVIEV TADITVQPAK RTKVMLHCES GEVLSVNRVV
IAAAFESQSL DARIFEFRKI RGQLSWFEPT TEQLQALPTL PLKYSGYCAP FIPQPGDEAV
NSVTPSVPTF LLGASFIRND LDDEIRLSEH AINHQKLLTA LPELSAVLPL PDTEADLYQR
WQARVGIRSQ TPDYHPLVGA VDEQGLIWTL SGMGSKGYAF APLCAQVLAD MMTAQFVPLP
AALLAKLSVH RSSLKKPLS
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