Gene PsycPRwf_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1892 
SymbolileS 
ID5204627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2349728 
End bp2352568 
Gene Length2841 bp 
Protein Length946 aa 
Translation table11 
GC content49% 
IMG OID640600123 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001280782 
Protein GI148653689 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATT CAACGACTTC AACCCCCGAT TACAAAGACA CGCTAAACCT TGCAGACACA 
GCCTTTCCAA TGCGAGGTAA CTTGGCCAAC CGCGAACCTG ATTGGCTAAA AGCTTGGGAA
GCAGATGATG TGTACGGCAA AATTCGTCAA GCAAAAGCCG GACGTGAAAA ATACATTTTG
CACGATGGCC CTCCATACGC CAATGGCCAA ATTCACTTAG GCCATGCAGT AAACAAAGTC
TTAAAAGATA TTATTGTTAA GTCCAAAACA CTTTCAGGCT TCGATGCGCC TTATGTACCG
GGCTGGGATT GTCACGGTCT GCCTATCGAA CAAAAAGTAG AAGCCAAAGT CGGCAAAGTG
GGTCAAAAAG TATCTGCCAC TGAATTTCGT GGCCTATGCC GTGAATATGC ACGTAGCCAA
GTTGAGCTAC AAATGGCTGA CTTTAAGCGT CTGGGCGTAT TTGGCGACTG GAACAACCCT
TATCTGACCA TGAACTTTCA CCAAGAGGCC AACATTGTAC GCGCCTTAGG TAAGATCTAC
GCCAATGGCT ATGTCACCCG CGGCATGAAG CCGGTGAACT GGTGTCTAGA TTGTGGCTCA
TCACTGGCTG AGGCGGAAGT GGAGTATGAG GATAAAACCT CAGATGCTAT CTATGTGGCT
TTTGACTTAG TGGACCCAAG TCAAGTTTTG CCAGAGGGCA ATAACGACAA AACCTCAGCG
GTTATTTGGA CGACTACCCC TTGGACCTTG CCGGCCAACC AGGCCATCGC GGTCAGCGCG
GAGGTTGAAT ACAGTGTGGT GAAGACCAGC AAAGGCAACT TTATTATTGC CAGCGAACTG
GTGGATAGCG CCCTACAAGC CTTTGGTCTA GACAACCAAG GCGTTATCAC CACCCTAAGC
GGCGATAAAC TAGAGCTGGT AAAAGTGCAG CACCCGCTTA TCGCCGAGCG TCAAGTGCCC
ATCATTTTGG GCGATCATGT GACCACTGAT AGTGGTACTG GCCTAGTGCA TACAGCACCT
GCACATGGTG CCGACGACTA TATTGTCAGC CTACGCTACA ACCTATCTGT CGTAAACCCT
GTGGCGGGCA ATGGCGTGTA TTTAGACACC GCCAAAGTCT TCGTGGGCGA GCATATTTAT
AAAGCTCAGC CAAAGATTAT TGCCCAATTA CATGACAGCG GTCATCTGCT AAAACATTAT
AAGATGGAGC ACAGCTATCC GCATTGCTGG CGCCATAAGA CCCCTATTAT TTTCCGTGCC
ACACCGCAGT GGTTTATCCG CATGGACCAT CAAGTAGCCG GTCGCAATAA TACCTTACGT
GAGCAAACTC TGACCGATAT TCCAAACGTC ACTTGGACAC CGGCCTGGGG GCAGAACCGT
ATCGAATCTA TGGTCGCAGG CCGCCCTGAT TGGTGTATCT CACGTCAGCG TACTTGGGGC
GTCCCTATTC CCTTCTTTAC CCATAAAGAC ACCGATGAGC TGCACCCTAA TACGCTTGAG
CTGATGGAAG ACATTGCACA GCTGATCGAA AAAGGTGGCG TGGAAGCTTG GTTTGATGCG
GATGCCAAAG ATTTCATTGG TGATGATGCC AATGACTATG TCAAATCGAC CGATACTTTA
GATGTGTGGT TTGACTCAGG TACCACACAC TTTGCCGTGT TAGAACAAGA TGATGCGCTG
GTCAATCCAG CCGATATGTA TCTTGAAGGC TCAGATCAGC ATCGCGGCTG GTTCCAGACT
TCGTTACTAA CCTCAGAGGC GATGTATGGC CGAGCGCCGT ATAAGCAAGT ATTGACTCAC
GGCTTCGTGG TGGATGAAAA TGGCCGCAAG ATGAGTAAAT CTTTGGGTAA TATCATCAAC
CCACAAGATG AGATCAACAA GACCGGCGCT GATATGCTAC GTATGTGGAT CGCCTCAAGT
GATTACCGTT ATGAGATGAA TGCTGGTAAA CAGGCATTTA AAGGCGCAAC TGATATGTAT
CGTCGTATCC GTAATACTGT GCGCTTCTTA CTGGCCAATA CCGATGACTT CAATCCAGAA
ACTGACAGCC TAGAGATGGA TGAGCTGGTA AGCTTGGATA AATACATCAT GCTGCGTGCC
CAAAAGGTGC AGCAAGCTAT TATCACCGCT TATGATGCGA TGGACTTTCA CCAAGTGACT
CAGCAAGTGA CCGCGTTTTG TTCACAAGAC TTGGGTGGTT TTTATTTAGA CATTATCAAA
GACCGTCAGT ACACCACCAT GGCGCAGGGT AAACCTCGCC GCTCAGCACA AACGGCCATG
TATCATATTG CTCATGCCTT GCTACGCTGG ATTGCCCCTA TCTTAAGCTT TACCGCTCAA
GAAGCTTGGG AAGCCTTACT AAAAGAGCGT GCAACAGGCG ACAACGCTTA TGTATTTACT
CAAGAGTGGT ATCAGCTGCC TGACTTTAGC ATGCAAAAAA TCAGTGAAGC GGACTGGGCA
ATTATCTTAG AGGCCAAAGA CGCGATTAAC AAGGTTATCG AGGGCGCCCG TGAAGCCAAG
TTGATTAACG CCAACTTATC AGCGGCCGTC AGTATTTATA CAGATGGTGA TGTCTATAGC
AGTCTGGCCA AGCTAGAAGA TGAGCTGCGC TTTGTATTAA TCACCAGCTC AGCGGCGCTG
CATAAGCTTG ATGATAATAC CGTAGGTAAT GAGACGGAGC TTGACAACCT ACGTGTGGCG
GTAACCCCAG CCGAGGGCAC CAAGTGTGTG CGCTGCTGGC ACGTGCGTGA TGATGTGGGC
ACCGACCCAA GTCATCCTGA AATTTGTACC CGCTGCGTCA GCAACATCCA AGGTCCAGGC
GAGGTTCGTC ATTATGCCTA A
 
Protein sequence
MTDSTTSTPD YKDTLNLADT AFPMRGNLAN REPDWLKAWE ADDVYGKIRQ AKAGREKYIL 
HDGPPYANGQ IHLGHAVNKV LKDIIVKSKT LSGFDAPYVP GWDCHGLPIE QKVEAKVGKV
GQKVSATEFR GLCREYARSQ VELQMADFKR LGVFGDWNNP YLTMNFHQEA NIVRALGKIY
ANGYVTRGMK PVNWCLDCGS SLAEAEVEYE DKTSDAIYVA FDLVDPSQVL PEGNNDKTSA
VIWTTTPWTL PANQAIAVSA EVEYSVVKTS KGNFIIASEL VDSALQAFGL DNQGVITTLS
GDKLELVKVQ HPLIAERQVP IILGDHVTTD SGTGLVHTAP AHGADDYIVS LRYNLSVVNP
VAGNGVYLDT AKVFVGEHIY KAQPKIIAQL HDSGHLLKHY KMEHSYPHCW RHKTPIIFRA
TPQWFIRMDH QVAGRNNTLR EQTLTDIPNV TWTPAWGQNR IESMVAGRPD WCISRQRTWG
VPIPFFTHKD TDELHPNTLE LMEDIAQLIE KGGVEAWFDA DAKDFIGDDA NDYVKSTDTL
DVWFDSGTTH FAVLEQDDAL VNPADMYLEG SDQHRGWFQT SLLTSEAMYG RAPYKQVLTH
GFVVDENGRK MSKSLGNIIN PQDEINKTGA DMLRMWIASS DYRYEMNAGK QAFKGATDMY
RRIRNTVRFL LANTDDFNPE TDSLEMDELV SLDKYIMLRA QKVQQAIITA YDAMDFHQVT
QQVTAFCSQD LGGFYLDIIK DRQYTTMAQG KPRRSAQTAM YHIAHALLRW IAPILSFTAQ
EAWEALLKER ATGDNAYVFT QEWYQLPDFS MQKISEADWA IILEAKDAIN KVIEGAREAK
LINANLSAAV SIYTDGDVYS SLAKLEDELR FVLITSSAAL HKLDDNTVGN ETELDNLRVA
VTPAEGTKCV RCWHVRDDVG TDPSHPEICT RCVSNIQGPG EVRHYA