| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1891 |
|---|
| Symbol | |
|---|
| ID | 5204626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2348761 |
|---|
| End bp | 2349459 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640600122 |
|---|
| Product | GTP-binding protein, HSR1-related |
|---|
| Protein accession | YP_001280781 |
|---|
| Protein GI | 148653688 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0218] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATG CACCAAAGAC CAAAAAACCC AAAGCTCCTC AATATATTGC GCCAGAATCG
GCTTCTGACT TATCACATTT GTCTCCCAGA AAGCGCTTAG AGCAAACTGA GTTTTTGATG
TCAGCGCCTA CTTTTAAGCT GTGTCCACCT GACACCGGCT ATGAAGTAGC TTTTGCTGGC
CGCTCAAACG CAGGCAAATC TTCAGCCATC AATGTATTGA CCAATCAGCG CCAATTGGCC
CGCTCTTCAA AGACACCGGG ACGCACCCAG ATGATTAACT TCTTTACCAT AGGTAATGAA
GAAGCACGGT TGGTGGATCT GCCAGGTTAT GGCTATGCCG CCGTGCCTGA GAAAATGAAG
CTGGTATGGC AAACTGAACT TGAAGAGTAC TTAGTGTCAC GTGAGAGCTT GGCAGGTTTG
GTACTGTTAA TGGACAGCCG CCATCCGCTA AAGTTCTTCG ATGAGCAGAT GCTACGCTGG
GCCAAAGATG GTGAACTACC TGTGCATGTT TTACTCACTA AAGCCGATAA GTTTAAATAC
GGTCCGGCCA AAAACATCTT ATTACAGACC AAACGAGAGC TTGAAAAACT TGATTTGCCC
TTTTCGATTC AGCTTTTCTC CTCTCTAAAA AAAGAAGGTA TCGATGAGCT GTCTGAAGTC
ATGGGCCGCT GGTTAAGAAT TGATGGCCAA GCTGAGTAA
|
|---|
| Protein sequence | MANAPKTKKP KAPQYIAPES ASDLSHLSPR KRLEQTEFLM SAPTFKLCPP DTGYEVAFAG
RSNAGKSSAI NVLTNQRQLA RSSKTPGRTQ MINFFTIGNE EARLVDLPGY GYAAVPEKMK
LVWQTELEEY LVSRESLAGL VLLMDSRHPL KFFDEQMLRW AKDGELPVHV LLTKADKFKY
GPAKNILLQT KRELEKLDLP FSIQLFSSLK KEGIDELSEV MGRWLRIDGQ AE
|
|---|
| |