| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1833 |
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| Symbol | |
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| ID | 5205855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2276992 |
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| End bp | 2278386 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640600062 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001280723 |
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| Protein GI | 148653630 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.36059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000906287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCCTTCA TTTCCAATCA AAAAACTCGA AAGTCTGTTA TTAAATGGAC CATTATTGCC
CTTATTGCGC TCGCTTTGGC TGTCTTAGCT TATAACAAAT TTAAACCCAA ACAAGAAGAA
ACCAATTATA TTACTGCCAC CGCTGAGATG GGTGATGTTG AAAATAACGT CATGGCATCA
GGCAAGGTCA AAGCCTTGAA TACAGTAGAT GTAGGTGCCC AGGTCTCAGG TGAAGTGACT
AAGCTATTTG TGGATGTGGG TGATGAGGTC AAAAAAGGCG ACTTAATTGC CCAAATCGAC
CAAGTCACTC AAAAGAACAA TCTTTCAAAT CAGCAGGCCA CCTTAGAGCA AGGCCGCGCC
GCGCTTCAAA GTGCTCAAGC AGACTACTAT AGCCGCAAAG CAGGATTAGA GAGTGCCCAG
GCCGATCTTG CCAGCCGAGA GGCAGACTTA AAACAGGCTC AATCTGATTA TGCCAGACTA
CGTCCACTAC TTGCGATGGA TGCCATCAGT CAGCAAGAGG TGGAGAATGC CCGTACCACT
GTCGAAAAAG CTCAAGCCAG TGTGGCCGCC GCAAAAGCAG CTATTAAAAC CGCTCAAGCG
GCACTCATTA CCGCTCAGTC CAATATCGCA AGCAGTGAAG CTGACGTGCG AAAAGCCCAA
ACCAACTTAG ACACTGCCAG TACAGACTTA GGCTACACCA CCATTCGTGC ACCCATGGAT
GGCACCGTCG TGGCTGTGGT CACCGAACAA GGTACAACGG TAAATGCCAA TCAAGCGGCA
CCCACCATCG TCAAATTAGC CGACTTATCA ACCGTCCGTA TTAATGCGCA AATCTCAGAG
GCAGATGTCA TTAACGTAAA AGCCGGTATG CCTGTGTACT TTAATACCAT CGGTGATCCG
GACAAAAAAT ACGATGCAAT CTTAACTGCC GTTGAGCCTG CACCGGAACA AATCAGTGAT
ACCAGCTCCA CCGACTCGGC GATTTACTAT GTTGGTTATA TTGAAGTGCC CAACCCAGAG
CGTCGTTTTC GTATTGATAT GACCGCACAG GTCTATGTGA TCATTGATAA GGCCACCAAT
ACCTTGCTTG TACCCTCTGC TGCGATCAAA AAAGGCCCTA ACAAAGGCGC TTCTGGCGCA
GCAAGATCTA GATCTGGCGC AGGCGGCAAC AATAAGCCAG CTTCAGCCGC TCCAGCACCA
GTCAAAGGTC CCTACGTGCG CGTGCTTAAT GCCGATGGTA GTGTAGAAAA TCGTGCGGTC
AAAGTAGGTA TTGATAACCG AGTCAACGCC CAGATTTTAA GCGGCCTAAA ACAAGGAGAG
ACGGTCATTA TTGGTGAAAA CTCAGGCGCC AAGGACAGTG GCAAAGGCCA ACGTAGTCGC
CCACCTGGCA TGTAA
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| Protein sequence | MAFISNQKTR KSVIKWTIIA LIALALAVLA YNKFKPKQEE TNYITATAEM GDVENNVMAS
GKVKALNTVD VGAQVSGEVT KLFVDVGDEV KKGDLIAQID QVTQKNNLSN QQATLEQGRA
ALQSAQADYY SRKAGLESAQ ADLASREADL KQAQSDYARL RPLLAMDAIS QQEVENARTT
VEKAQASVAA AKAAIKTAQA ALITAQSNIA SSEADVRKAQ TNLDTASTDL GYTTIRAPMD
GTVVAVVTEQ GTTVNANQAA PTIVKLADLS TVRINAQISE ADVINVKAGM PVYFNTIGDP
DKKYDAILTA VEPAPEQISD TSSTDSAIYY VGYIEVPNPE RRFRIDMTAQ VYVIIDKATN
TLLVPSAAIK KGPNKGASGA ARSRSGAGGN NKPASAAPAP VKGPYVRVLN ADGSVENRAV
KVGIDNRVNA QILSGLKQGE TVIIGENSGA KDSGKGQRSR PPGM
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