Gene PsycPRwf_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1831 
Symbol 
ID5205853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2274962 
End bp2275651 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content47% 
IMG OID640600060 
Producthypothetical protein 
Protein accessionYP_001280721 
Protein GI148653628 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.314061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000648617 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACTCATT TGGTAACAGC CCCAACTCAC AAGCAAAGTG ATAAGCATCG TGGTCTATCC 
ACTATGCTTA TCACTGCTGT ACTGCTGGGC TCACCGCTTT TGCTCAGCAG TTGCGGCTTT
CATCTGCGTG GCTACGATGC ACCTATGGCC TACTCAGTGG GTAGTACAGT GCTTAGTATC
AATGAAGATG ATATCGTAAG CTTTCGTATC AAGCGCCCCT TAAAGCAGCG CTTGAATGCT
GTGGGTATCA ATGTGGTCGA TGATATTGGC CGCCAGATCA ATAGCAGTAA TCAGCTTTAT
ACCTCGACCA TTAAGGTCAG TAACGTACAG CTGAAACGTT ATGAGCTGGT CGGGGTACTG
ACCGAGGTAC GTCTGGTGTT ATCAGCCGAT GTCATCTACG AGACCTTGAA TAATAGCGAT
GGCGCTTCAA GCGCACCCAT GATTGTCAAA AACAAGGTGC AGGTAGAGCG TACTTATCAG
TTCGATGAGG CCTCTGTGAG TATTGAGGAC AAGCAAGGTG CTCAAATTCA AGATTGGCTG
TATGACAACT TATCTCAGCG TATTGCAGAT CAATATGTGG CCTTAAGCCT ACCTAGGGTA
GCGCCTGAAG CGAGCACTAA ACAAAACCCT AAGCCTTTGG TAGTCGCCCC AAAATCTGAT
GCTAGTACCA ATGCCGAGCT TGTCCCTTAA
 
Protein sequence
MTHLVTAPTH KQSDKHRGLS TMLITAVLLG SPLLLSSCGF HLRGYDAPMA YSVGSTVLSI 
NEDDIVSFRI KRPLKQRLNA VGINVVDDIG RQINSSNQLY TSTIKVSNVQ LKRYELVGVL
TEVRLVLSAD VIYETLNNSD GASSAPMIVK NKVQVERTYQ FDEASVSIED KQGAQIQDWL
YDNLSQRIAD QYVALSLPRV APEASTKQNP KPLVVAPKSD ASTNAELVP