Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1831 |
Symbol | |
ID | 5205853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2274962 |
End bp | 2275651 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640600060 |
Product | hypothetical protein |
Protein accession | YP_001280721 |
Protein GI | 148653628 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.314061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000000648617 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACTCATT TGGTAACAGC CCCAACTCAC AAGCAAAGTG ATAAGCATCG TGGTCTATCC ACTATGCTTA TCACTGCTGT ACTGCTGGGC TCACCGCTTT TGCTCAGCAG TTGCGGCTTT CATCTGCGTG GCTACGATGC ACCTATGGCC TACTCAGTGG GTAGTACAGT GCTTAGTATC AATGAAGATG ATATCGTAAG CTTTCGTATC AAGCGCCCCT TAAAGCAGCG CTTGAATGCT GTGGGTATCA ATGTGGTCGA TGATATTGGC CGCCAGATCA ATAGCAGTAA TCAGCTTTAT ACCTCGACCA TTAAGGTCAG TAACGTACAG CTGAAACGTT ATGAGCTGGT CGGGGTACTG ACCGAGGTAC GTCTGGTGTT ATCAGCCGAT GTCATCTACG AGACCTTGAA TAATAGCGAT GGCGCTTCAA GCGCACCCAT GATTGTCAAA AACAAGGTGC AGGTAGAGCG TACTTATCAG TTCGATGAGG CCTCTGTGAG TATTGAGGAC AAGCAAGGTG CTCAAATTCA AGATTGGCTG TATGACAACT TATCTCAGCG TATTGCAGAT CAATATGTGG CCTTAAGCCT ACCTAGGGTA GCGCCTGAAG CGAGCACTAA ACAAAACCCT AAGCCTTTGG TAGTCGCCCC AAAATCTGAT GCTAGTACCA ATGCCGAGCT TGTCCCTTAA
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Protein sequence | MTHLVTAPTH KQSDKHRGLS TMLITAVLLG SPLLLSSCGF HLRGYDAPMA YSVGSTVLSI NEDDIVSFRI KRPLKQRLNA VGINVVDDIG RQINSSNQLY TSTIKVSNVQ LKRYELVGVL TEVRLVLSAD VIYETLNNSD GASSAPMIVK NKVQVERTYQ FDEASVSIED KQGAQIQDWL YDNLSQRIAD QYVALSLPRV APEASTKQNP KPLVVAPKSD ASTNAELVP
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