| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1808 |
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| Symbol | |
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| ID | 5204624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2244240 |
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| End bp | 2245304 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640600035 |
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| Product | ribonuclease Z |
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| Protein accession | YP_001280698 |
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| Protein GI | 148653605 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0346445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAGT TTACCTTCTT GGGCACCTCG GCAGGCATCC CCACAAAAAA GCGTAATGTC
ACAGCCTTAG CCATTGAATG CCTCAACCCT TACGCCGCAA ACAGTGCGCA ACAAAGCGGC
AGTAAAAAGC CTTGGGTCTT GATAGATTGT GGCGAGGCTA CCCAGCATCA ATTATTACAC
ACTAAGCTGA GTGTTAGGCA CTTAGCGGCT ATCTGTATCA CCCATGTGCA TGGTGATCAC
TGTTATGGCT TGCCTGGGCT GCTTGCAAGT ATGGCGATGT CGGGACGCAC AGCGCCGCTG
ACCCTTATTG CTCCTAAGGC TATTTTAACC TTGATACAGG CAGTGCAATC CACTACAGAT
TTGTATTTGC CCTATGATAT TGATTTTGTG GCCATAGAAG ATAAGGTGTG CGCAGATCAG
AGCATAGCTA ACCCCGTTAT CTTACAGTTA TCTGCAGCGC ATAAGCTTGA GATTAAAATC
GTTAAGCTAT CACATCGGGT TGCCTCATAT GGCTTTGTGA TAACTCAAGT GGTGCAGAGC
CTTAAACTCA ATACTCATAA ATTAAAAAAG CAGGGCATTG CGGCTACTGC TGCCTGGGGT
CAGCTGCAGG CAGGGCAGGA TGTGATGTTG GAAGATGGTC GCAAGCTGGT CTCTGTAGAG
TATACTTACC GTGAGAGTCA GCAGTTAAAA GTGGTTGTTG GTGGGGATAA TGACACCCCA
GAATTATTGC AACAAGCAGT ACAAGGTGCC AATGTGCTCA TCCATGAGGC AACCTATACT
CAGAGTGTCA GAGACAAAAT CATGTCACGA CCTGATGGCT TTGATCCGAT GCACACCACA
GCTAAGTGTA TTGCTCAATT TGCGCAGGCG ATGCAGTTGC CGGCATTGAT TTTGACACAT
TTTAGTGCCC GTTATCACAG TTATGATGAC CCTGAGAGTA AAGCACCTAA TATGGCGGAT
ATCCGCTTAG AGGTGGGGCA GTATTATCAA GGCAAGCTGT GGCTGGCGCG TGATTTTATG
CGTTTTTTGG TGGACAGTGA TGGGGTTCGT CAGCTGCCCA CGTAA
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| Protein sequence | MLQFTFLGTS AGIPTKKRNV TALAIECLNP YAANSAQQSG SKKPWVLIDC GEATQHQLLH
TKLSVRHLAA ICITHVHGDH CYGLPGLLAS MAMSGRTAPL TLIAPKAILT LIQAVQSTTD
LYLPYDIDFV AIEDKVCADQ SIANPVILQL SAAHKLEIKI VKLSHRVASY GFVITQVVQS
LKLNTHKLKK QGIAATAAWG QLQAGQDVML EDGRKLVSVE YTYRESQQLK VVVGGDNDTP
ELLQQAVQGA NVLIHEATYT QSVRDKIMSR PDGFDPMHTT AKCIAQFAQA MQLPALILTH
FSARYHSYDD PESKAPNMAD IRLEVGQYYQ GKLWLARDFM RFLVDSDGVR QLPT
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