| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1792 |
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| Symbol | |
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| ID | 5205059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2222358 |
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| End bp | 2223719 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640600017 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_001280682 |
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| Protein GI | 148653589 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000197904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACA AACAAAATCA TGCCCAGTGG AGCTCGAAAG TGGGCTTTAT TATGGCTGCC
GTTGGTTCGG CGGTTGGCTT GGGAAATATT TGGAAATTCC CGTATATGGT AGGCGAAAGT
GGGGGTTCTG CTTTCGTATT GGCATATTTG TTGTGTATCG CGCTGATAGG TTTCCCTATC
TTAGTGGCTG AATGGATGAT CGGTCGCCGC GGACAAAAAA ACCCGATGGA CTCTTTTTCT
GATGTGGCCG CAAGTGAAGG CAAAAGCAGA AACTGGGCCA TCGTTGGTGT GGTGGGTATT
TTAGGTGCCT TTTTAATTCT ATCGTTTTAT AGTGTGATCG GTGGCTGGGC CTTGAACTAT
ATGGTTAAGC TAGGTTCTGG CACTTTTACT GGCTTAAATG GTGAAGCGGT AGAGGGCGTG
TTTAACGGTA TGTTGGCCTC TCCTGGCACC TTGACCATTT GGCACACAAT ATTTATGGGT
GTCACTGCAA TCATTGTGGC GCTTGGCGTG ACCAGTGGTA TCGAAAAAGC TTCAAAAATT
ATGATTCCTA TGTTGGCGCT TTTGCTATTC GTCATCGTAG GCTACAACAT TATGAATGGT
GGTTTTGCAG AAGCGGTGAC TTATTTATTC TCACCTGACT TATCTAAGTT GACCGGTCCT
GACTCATCAA CCATTATCTT ATCAGCGTTA GGTCATGCCT TTTTTACCTT ATCTTTGGGT
ATGGGTATCA TGGTCACTTA TGGCTCTTAC TTGGGTAAAA ACATCAGCTT ATTGAGCATG
GCGCGTACTG TAGTTATCTT GGATACCGTG ATTGCTCTTG TAGCAGGTTT GGCGATTTTC
CCAATTATCT TTAGTCATGG TATGGATCCT GCTGCAGGCC CTGGCCTTAT CTTTGTAAGC
TTACCGATTG CCTTTGGTAG TATGACAGCA GGCGCACTTT TGGGTACCTT GTTCTTCTTA
TTGGTGACCT TTGCAGCGCT GACCTCTTCT ATTTCATTGA TTGAGCCCTC TATTGAGTTC
TTAGAAGAGC GTACGTCAAT GAGCCGTACG ACCTCAGTTA TCGTGGCCAC TATCGCCATT
TGGTTATTGG GTGTGGCGGC ATTATTGTCT TTCAACTTAT GGTCAGATGT ACTTATCTTC
GGCAACAATA TCTTTGATTT ATTAGATAAG TTGACCAGTA AATTTATGTT GCCACTGGCC
GGCTTGGCCG CGATTGTATT TGCCGGCTGG GTCATGAGCC AAGACAGCGT ACGTCAAGAG
CTGGGGCTTT CAGGCGGTGC TTGGACCTTG TGGCAAATAG TGGCTAAGTT TATTGCGCCA
ATTGGGGTAA TTATTGTCTT TATTAATACT TTGATAAGCT AA
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| Protein sequence | MSNKQNHAQW SSKVGFIMAA VGSAVGLGNI WKFPYMVGES GGSAFVLAYL LCIALIGFPI
LVAEWMIGRR GQKNPMDSFS DVAASEGKSR NWAIVGVVGI LGAFLILSFY SVIGGWALNY
MVKLGSGTFT GLNGEAVEGV FNGMLASPGT LTIWHTIFMG VTAIIVALGV TSGIEKASKI
MIPMLALLLF VIVGYNIMNG GFAEAVTYLF SPDLSKLTGP DSSTIILSAL GHAFFTLSLG
MGIMVTYGSY LGKNISLLSM ARTVVILDTV IALVAGLAIF PIIFSHGMDP AAGPGLIFVS
LPIAFGSMTA GALLGTLFFL LVTFAALTSS ISLIEPSIEF LEERTSMSRT TSVIVATIAI
WLLGVAALLS FNLWSDVLIF GNNIFDLLDK LTSKFMLPLA GLAAIVFAGW VMSQDSVRQE
LGLSGGAWTL WQIVAKFIAP IGVIIVFINT LIS
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