Gene PsycPRwf_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1764 
Symbol 
ID5205796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2184913 
End bp2185401 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content48% 
IMG OID640599989 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_001280654 
Protein GI148653561 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.190607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC GAATTCTAAG TGTCGGCAGT AAAATGCCTA AATGGATTGA TACCGGGTTT 
AATGAGTATC ACAAACGTAT TCAGCCGATG TTGACTACCG AAATGGTCGA TTTGGCCGCT
GCAAAACGCG CCAAAAACCC CTCAGAAGCC AATCTAGCAC AGTATCGTGA GCAGGAGGGA
AAAGCCATTT TGGCCACCCA TCAAAGTAAC TCACGTGAGA AGCTTTGGGT GCTCGACGTT
AAGGGTAAGA TGCTATCGAC CGAGCAGTTA GCCGATAAGC TCAGTGAAGC GATGCAAGTT
GGTGACGATG TGGCATTGGT GATTGGCGGC GCTGATGGGG TGTCACCTGA GGTACTGGCC
GCAGCGGACT TTAAGTGGTC ATTATCACCA TTAACTCTGC CCCATCCCTT GGTACGTGTG
GTATTGATGG AGCAGCTTTA TCGAGCAATG AGTATCAATA ACAATCACCC TTATCACCGC
GGTAATTAG
 
Protein sequence
MKLRILSVGS KMPKWIDTGF NEYHKRIQPM LTTEMVDLAA AKRAKNPSEA NLAQYREQEG 
KAILATHQSN SREKLWVLDV KGKMLSTEQL ADKLSEAMQV GDDVALVIGG ADGVSPEVLA
AADFKWSLSP LTLPHPLVRV VLMEQLYRAM SINNNHPYHR GN