| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1740 |
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| Symbol | |
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| ID | 5206007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2153311 |
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| End bp | 2154546 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599965 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_001280630 |
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| Protein GI | 148653537 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.170655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGTC CATTAGCCTT ATTTTTAGGA TTACGTTATA CGCGCGCTGA GCGTAGTAAC
CGCTTTATCT CATTAATTTC ATTAATTTCT ATGGTGGGAT TGACCCTTGG GGTCGCAGTA
TTGATTACGG TCTTGTCCGT CATGAACGGT TTTGATCGGG AGCTTAAGAC CAGGATTTTG
GGTATGGTGC CCCAAGCGAC CGTCACTTCA GCGGAAATTA TCCCTGATTG GAAAAACCTC
GCCAATGAAA TTAAAAAAGA CCCCGAAGTA CATGCAGTGG CGCCCTTTAT TGAGCTACAA
GGCATGTTAA CTTCTAATGG TCAGGTGGCC GGCATTATGG TCACTGGGGT TGAGCCTGAG
TATGAAAAAA ATGTCTCTAT CATCAATGAG CACATGGTTG AGGGCAGCAT AGACACCCTA
AAAGATGGCG ACTTTAGTAT TGTGCTTGGT GAGAGTATGG TGGAGGCCTT GGGCTTACAA
GTGGGTGATA AGGTGACTTT GGTATTGCCA GAAGCGTCGC CATCGCCTGC AGGCGTTATT
CCTCGTTTTA AGCGCTTTAC CTTAACGGGC GTGTTTAATA TTAGCCGTGA AGTAGATAAC
CTAGTGGCGT TTATTCCTAT GGGTGATGCG GCGACGCTTT TGCGCTTACC TGAGGGCGCG
CAAGGCATTC GAATGAAGCT TGATAATATT TTCTTAGCAC CTCAAGTGGC TCAGCGTGCT
GCTAAAATCA ATCCGCAGCA GCTGTTTCCC AATGACTGGA CACGTACTCA TGGCAATTTA
TTTGGTGCAA TCCAAATGGA GAAGGCCATG GTGGGGTTAT TGCTGTTTTT AATCATCATC
GTCGCCGCCT TTAATATTGT CTCAAGTTTG GTGATGCTGG TAACTGATAA AAAAGCAGAT
ATTGCAATTT TAAAGACCTT TGGCGCCTCT CCAAAACTCA TTACCCAAGT ATTTATGGTA
CAAGGACTGG TTATCGGTGT CATTGGTACG GTAGCGGGTA CTATCTTGGG GGTGATTTTG
GCACTGACCA TTGGCGATTT GCTAGGCTGG GTCAACCAAG CATTTAACCT ACATTTATTT
GATGCGTACT TTATCAATTA TCTGCCCACA GAGCTGCGCT GGCTAGATGT GCTGATCATT
ACCAGCACCT CATTCTTATT GAGCTTTTTG GCGACCATTT ATCCCGCTCG CCGAGCAGCC
AATATTCAGC CGGCCCAAAC CTTACGCTAC GAATAA
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| Protein sequence | MFRPLALFLG LRYTRAERSN RFISLISLIS MVGLTLGVAV LITVLSVMNG FDRELKTRIL
GMVPQATVTS AEIIPDWKNL ANEIKKDPEV HAVAPFIELQ GMLTSNGQVA GIMVTGVEPE
YEKNVSIINE HMVEGSIDTL KDGDFSIVLG ESMVEALGLQ VGDKVTLVLP EASPSPAGVI
PRFKRFTLTG VFNISREVDN LVAFIPMGDA ATLLRLPEGA QGIRMKLDNI FLAPQVAQRA
AKINPQQLFP NDWTRTHGNL FGAIQMEKAM VGLLLFLIII VAAFNIVSSL VMLVTDKKAD
IAILKTFGAS PKLITQVFMV QGLVIGVIGT VAGTILGVIL ALTIGDLLGW VNQAFNLHLF
DAYFINYLPT ELRWLDVLII TSTSFLLSFL ATIYPARRAA NIQPAQTLRY E
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