| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1737 |
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| Symbol | |
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| ID | 5206004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2147974 |
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| End bp | 2149038 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599962 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_001280627 |
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| Protein GI | 148653534 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000391092 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.794877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAACT GGCCGCCAGA TCCAAATAAA ACTCCCGATA ACACCCCCAC ACCCAACAAC
TCAGACAATC CATCACCGCG AGTGATGCCG GTAAGCTCTG GGGGCCGAGA GTGGCACTTG
CTTGAAAAAA CCTTATTGGC AAGCATTGAA GAGCAGCGCC GTGCTCGACG CTGGCGCGTG
ATTTCTAAAG TATTAAGCTT GCTTACCTTA CTGCTATTAT TTTTTATGCT CAGCCGCAGT
TGTAGTACTG CCGAGAGCAT TAGCAGCGTT GATGTGACCA AGCCGCATAT TGCTGTGGTG
GATTTGCAAG GGGTCATTAG TGCTGATAAT ACCGCTAATG CCTACGATGT TAGCGCTGCT
TTATCTGAAG CATTCGAATC AAAAGGCGCC AAGGCTGTCG TGTTGAATAT CAACTCGCCC
GGTGGCTCTC CGGTGCAGTC AGATGAGATT TGGAAGACCA TGATGTCGCT ACGTAAAGAG
CATCCCAATA AAAAGCTGTA CGCGGTGATC GGTGATATGG GGGCTTCAGG GGCATATTAT
ATTGCTTCTG CGGCTGATGA GATTTACGTT AATCCTTCAA GCTTGGTTGG CTCAATTGGT
GTTATTATGC CAGGCTATAA CCTAAAAGGC TTGATGGATA AGTACGGTGT AAAAGATGCC
ACACTGACGG CTGGTGAGTA CAAAGATATC CTAAGCATGA GCCGTGATTT AACAGACTTT
GAAAAGCAGC ACATCAAAGG CGTGTTAGAC AATACGCATA AGCATTTTAT TGATGCTGTG
AAAAAAGGCC GCGGCGACAG ACTAAAAAAT CCAGAAGAAA ATAAGCTATT TACTGGGCTG
TTCTGGACAG GTGAGCAAGC CATTGCTTTG GGTCTGGCCG ATAAAAAGGG CAGCTTAATG
AGCTTGGAAA AAGAGCTGGA TATTGATAAT GTAGTAGATT ACACCCCAGT TGATCCGATG
CAGATGTTCT TAAATAACTT TGCTCTACAA TTGGGCTCTG GTATTGGTTC TTCGGTAGAA
CTAAAGCTAT TGCCAGAGGA ACAAACTTCA GCTGAGATGA AATAA
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| Protein sequence | MSNWPPDPNK TPDNTPTPNN SDNPSPRVMP VSSGGREWHL LEKTLLASIE EQRRARRWRV
ISKVLSLLTL LLLFFMLSRS CSTAESISSV DVTKPHIAVV DLQGVISADN TANAYDVSAA
LSEAFESKGA KAVVLNINSP GGSPVQSDEI WKTMMSLRKE HPNKKLYAVI GDMGASGAYY
IASAADEIYV NPSSLVGSIG VIMPGYNLKG LMDKYGVKDA TLTAGEYKDI LSMSRDLTDF
EKQHIKGVLD NTHKHFIDAV KKGRGDRLKN PEENKLFTGL FWTGEQAIAL GLADKKGSLM
SLEKELDIDN VVDYTPVDPM QMFLNNFALQ LGSGIGSSVE LKLLPEEQTS AEMK
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