| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1727 |
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| Symbol | |
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| ID | 5206200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2136460 |
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| End bp | 2137755 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599952 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_001280617 |
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| Protein GI | 148653524 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000138286 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGG TAGCATCCGA GACAACCGCA GCAAAAGCGC AATCTACAGA CAAAAAAATT
GCCTCTATTT ATGACAGCAG CAAGCTACTA GATGTTGAGG CTATTGCACG TGAGCGACAA
GCGTCAGCAG ATTTACCTGT GCACTGGGTG GCAGATTTTG ATGCCCTAGA GGCCTGTTTA
GATGATTTAG AGACCTGCGA TCGGGTGGCA CTAGATACCG AATTCATTAA GCGCAATACT
TACTTTCCTA TTCTAGCGCT GGTGCAGATT AATACCGGTA AAGCCATCTA TTTGATTGAT
GCACCGAAGC TTGATTTGAC GGAGTTTTGG GTGGTATTAG AAGAGATGCC ATTGATGATT
TGGCATGCTT GCGGTGAGGA TCTGGGTATT TTTTATCTGC TATCAGAAAG CCCTGCGCTC
ACCAATGTGT TTGATACTCA AATTGCTTTG TCTTATCTAA CCGGACAGCT ACAGATGGGG
TATCAGCAAG CACTGAGCCA AGAGCTTGAT GTGCATGTCG AAAAAGCAGA GAGCCAATCA
GATTGGCTGG CACGTCCGTT GAGCCATGAG CAAGAAAATT ATGCCATTGA TGATGTGCGT
TATTTGCTCA ATTTATACGA TATATTGCAG CAGCAACTGA GCAAGCAGGG CTTAACTGAT
AAAGTGGTTG AGGACTGTCA GTTGTATGCC AAAGAGCTGT ATGAATCGGC CAATATCGAA
GATGACGCCA CTTATCTGGC TATGGCAGAT TTTCGCTATA CCCCAGAGCA GTTGGCGGTA
TTACAAGCGG TATCTAGCTG GCGCGAAGCA TTGGCTCGCG CGACCAATCA GCCCAAGACT
TTTGTGCTAA AAAAACAAGC CGTACGTGAT TTGGTGGTAG AGATGCCAAC CAGTATTAAG
CAGCTGACTC AAAAGACCAC CATGCACCGC AGTATCGTAC GCTTATATGG TGATGAGCTG
ATCCAAGTGA TTAATCAGGC CAAGGCGCTA AGCCCAGAGG AGCAGCCACC ACGGATTTTT
CCACCCTACC GCTCTAAAGA TAAGAGTGTC TCAAAAGCGG TCGATCAGGT GATTAAGCAA
TATGAGGAAC AGACTGGCGT GCCTGCCAAT GTGCTGATGC GCAAAAAATG GCTGTCAAGC
TTATATGAAA TTGTGGCCTA TGACTTACCA CTTGAGCAGC TGCCTGAGGG TCTAAAAGGT
TGGCGCAATG AATGGGTGAT GAGCACCTTA ATTCCACTTA TCACGTCTCA CAAAGAAGCG
CTAAAAGCGG GTATGAGCAT GCAAGAGGAT GACTAG
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| Protein sequence | MTQVASETTA AKAQSTDKKI ASIYDSSKLL DVEAIARERQ ASADLPVHWV ADFDALEACL
DDLETCDRVA LDTEFIKRNT YFPILALVQI NTGKAIYLID APKLDLTEFW VVLEEMPLMI
WHACGEDLGI FYLLSESPAL TNVFDTQIAL SYLTGQLQMG YQQALSQELD VHVEKAESQS
DWLARPLSHE QENYAIDDVR YLLNLYDILQ QQLSKQGLTD KVVEDCQLYA KELYESANIE
DDATYLAMAD FRYTPEQLAV LQAVSSWREA LARATNQPKT FVLKKQAVRD LVVEMPTSIK
QLTQKTTMHR SIVRLYGDEL IQVINQAKAL SPEEQPPRIF PPYRSKDKSV SKAVDQVIKQ
YEEQTGVPAN VLMRKKWLSS LYEIVAYDLP LEQLPEGLKG WRNEWVMSTL IPLITSHKEA
LKAGMSMQED D
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