Gene PsycPRwf_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1714 
Symbol 
ID5204749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2120593 
End bp2121387 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content48% 
IMG OID640599939 
ProductABC transporter related 
Protein accessionYP_001280604 
Protein GI148653511 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0481461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAG CCAATGACCT ACGACTGACC TTTAACCGAG GTACTCCGAT AGAAAACCCT 
GCGCTGCGTG GCATTAGCTT AAACATCGCT GAAGGCGAGT TTGTGACCGT AATTGGCACC
AACGGCGCAG GCAAATCTAC CTTTTTGAAC GCAGTAAGCG GCACCACCCG TGTTGATAGC
GGCTCAATCT TATTAAACGG TGTTGATGTC ACCAAAAAAA GTGCGCACCA AAGAGCGCAC
TGGGTGGCTC GGGTATTCCA AGACCCTATG GCCGGTACTT GTGAAGCACT AACCATTGAA
GAAAACCTTG CGTTAGCCTA TAAACGCGGT GGTAAACGTG GTTTAAGCTT TGCGCTTAAT
AATAAAAACC GTGATTTGTT CCGTGAAAAG CTGTCTATCC TAAAGCTGGG ACTTGAGAAC
CGCTTAACCG ATAGAATGGG GTTATTATCA GGGGGTCAAC GTCAAGCAGT CAGTCTGCTT
ATGGCCTCAC TACAGCCCTC AAAAATCTTA TTACTTGATG AACATACCGC AGCTTTAGAC
CCCAAAACTG CCGCTTTTGT CTTGGAGCTG ACCGATAAAA TTGTCACAGA CAACAATCTG
ACCACCATGA TGGTCACCCA CTCCATGCAG CAAGCCTTAA CCCACGGCGA TCGCACCGTG
ATGCTGCACC AAGGCCAAGT GGTATTAGAT GTCTCCGGTG ATGTACGACA AGGTATGACT
GTGCATGATC TATTAGATAT GTTTGAGCAA ACTCGGGGCG AAAAGGTAGA GGATGACAGC
CTGATTTTAA GCTAG
 
Protein sequence
MMQANDLRLT FNRGTPIENP ALRGISLNIA EGEFVTVIGT NGAGKSTFLN AVSGTTRVDS 
GSILLNGVDV TKKSAHQRAH WVARVFQDPM AGTCEALTIE ENLALAYKRG GKRGLSFALN
NKNRDLFREK LSILKLGLEN RLTDRMGLLS GGQRQAVSLL MASLQPSKIL LLDEHTAALD
PKTAAFVLEL TDKIVTDNNL TTMMVTHSMQ QALTHGDRTV MLHQGQVVLD VSGDVRQGMT
VHDLLDMFEQ TRGEKVEDDS LILS