Gene PsycPRwf_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1711 
Symbol 
ID5206836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2117035 
End bp2118147 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content49% 
IMG OID640599936 
Producthypothetical protein 
Protein accessionYP_001280601 
Protein GI148653508 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCAA ATTATTCCTC CTCTTTGCCT TATCGCAGCG CTGCTGCCAC TCTTAATACT 
CAACCAAAAA GTAACAAAGT TTGGCAAGGC TTATTGGCTT TGGGTATGGG CTTAAGCTTA
GCTGCACTAA GTGGCTGCTC GGATGCCAAT CAAGCGCAGC AAGAGCCTGT CGCTGATGCG
CCTGCCAAAG AAGCCAAGAC CATAGCCATT ACTCAAATCG TTGAGCATCC CTCACTTGAT
GAGATTCGCC GCGGCATTAC CGAAGAGTTG GCCGCCAATG ATTATGTGGA AGGTAAAAAC
TTAACGGTGA ATTTCCAAAG CGCACAAGGC AATACCGCCA CCGCCGGTCA GATTGCCAAG
CAGTTCGCCG GTGATATGCC AGATGCCATT GTGGCCATTT CTACCCCATC GGCACAAACT
GTGGTGGCCT CTACTAAGAA TATTCCGGTT ATTTATACTG CCATCTCTGA TCCTTTGGCC
GCCAAACTAA TTAATGAAAA TAACGTACCG ACCCAGCCGA ATGTCACCGG CTTATCCAGT
CAGCTGCCTA TCGAGCCGCC GCTGGATTTA ATCCAGAAGA TTGTGCCACA GGCCAAGACC
ATTGGTTATG TATACAGCCC TGGGGAGGCC AACTCAGTCA CGGTATTAAA GCAGCTACAA
GCTGCCGCAC CGGCTCGGGG TCTAAAAATA TTAGAGGTGA CTGCCAACCG TCCTAATGAT
GTGGCTATGG CAACCCGTAG CTTACAAGGC CGTGTCGATG TGATTTATAC CTCACTTGAT
AACAATGTCA TTAGTGCTTT TGAAGCCATG GCTGGCGCTG CTAATGAGAT GAAAATCCCA
GTCATTACCT CAGATGAGTT CAGTGTGCGC CGCGGTGCCA CAGCAGCTTT AGGTGTTAAT
GACTATGATT TTGGCCGCGT GACCGGCAAG ATGGTATACC GCGTGCTAAA CGGTGAAGCG
ATTACCGATA TCAAGCCTGA GGTAATGAAC AAGCTAACTT TGTATGTCAG CCCAAAACAT
GCCCAACAGC AAGGGGTTAG CTTAGATCCC TCTATCTTAA AAGGGGCAGT TAACGTGGAT
GAGACCAAAC CCAGTACTGA GCCCAATAAA TAA
 
Protein sequence
MQSNYSSSLP YRSAAATLNT QPKSNKVWQG LLALGMGLSL AALSGCSDAN QAQQEPVADA 
PAKEAKTIAI TQIVEHPSLD EIRRGITEEL AANDYVEGKN LTVNFQSAQG NTATAGQIAK
QFAGDMPDAI VAISTPSAQT VVASTKNIPV IYTAISDPLA AKLINENNVP TQPNVTGLSS
QLPIEPPLDL IQKIVPQAKT IGYVYSPGEA NSVTVLKQLQ AAAPARGLKI LEVTANRPND
VAMATRSLQG RVDVIYTSLD NNVISAFEAM AGAANEMKIP VITSDEFSVR RGATAALGVN
DYDFGRVTGK MVYRVLNGEA ITDIKPEVMN KLTLYVSPKH AQQQGVSLDP SILKGAVNVD
ETKPSTEPNK