| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1708 |
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| Symbol | |
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| ID | 5206833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2111885 |
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| End bp | 2113225 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599933 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_001280598 |
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| Protein GI | 148653505 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCAGA TGCTTACCAA TGCCAGCGTT CAGCTGGTTA ATCGCTATTT ACCCTCTCCT
TTTGTTTTCT CCATTGTGTT AACCCTGATT GCCTTTTTGG GTGGTGTCTT ATTGACCGGA
CAAGATGTGC TGACCATGGC GGGACACTGG GGCGGTGGAC TGTGGTCGTT ACACAGCTTT
GCTATGCAGA TGGCACTGGT GTTGGTTACC GGTTACGCTT TTGCCAATGC GCCCATCATT
CAACGTTTTT TAGACAGTCT GGCCTCAAAG GTCACCTCAC CGACCACAGC CATTGTCATC
TCAACGTTGG TGGGGCTGGC AGGCTCATGG ATTAACTGGG GTTTTGGTCT GGTGGTCGGG
GCTATTTTTG CCAAGTCTTT GGCCAGAAAG GTGCCTAATG TGGATTATCC CTTATTGGTG
GCAGCGGCTT ATTCTGGTTT TGTGATTTGG CATGGCGGCT TCTCAGGATC TATTCCCTTA
ACCTTAAGTA CGGGCGGCGA TAACTTGCAG ACGCTCTCAG GTGGGGTATT AACCGAAGCA
ATTCCTTTAT CACAGACGAT TTTTGCTTCA TATAATCTTA TTATTTTGGC CGCTTTAATT
GTGGTATTGC CAATAGTCAA CCGCATGATG CACCCAAAAA ATCCGACCAC AGTAGATCCG
GCGCTCATTA AAATAGAGGC TTATGTGGCC CCTGAAACTA ATACACCGGC TCAAAAATTA
GATGACAGCC GCGTGGTGGC CATCATCTTA CTGCTGCTAG CGCTGATGTA TTACATCAAT
TACTTTTCGA CCAATGGCTT TAACTTAGGA TTAGATATCG TTATCGGTCT GTTTTTATTT
ATTGGACTGA TGGCGCATGG TACCCTTGAG CGTTATTACC GTGCAGTGAA ATCAGGTATT
GGGGGTATTG CCGGTATCGT TTTGTTGTTC CCATTTTATG GCGGTATTAT GGGGATTGTG
ACGGGTGCTA ATGCTGATGG GGTGTCTATT AGTAGTGAAG TGACTGAGTT TTTTGTGAAT
AATGCCACAG CCGATAGCTT TCCTGTCTTT GCCTTTTTAA GTGCAGGCTT GGTAAACATC
TTTGTACCCT CAGGCGGCGG TCAGTTTGCG GTACAAGGGC CGGTGATGAT GCCAGCAGGC
TTGGCGTTGA ATGTCAGTCC AAGTGTGACC GCCATGGCGA TTGCTTGGGG CGATGCTTGG
ACCAATATGA TTCAGCCCTT TTGGGCACTG CCACTTCTGG GTATCGCAGG ATTAGATGCC
AGAGCCATTA TGGGCTACTG TCTGATTATC CTAGCGGTCT CAGGCGCTAT TATTACGGGG
GGTTTTTGGT TATTGGTATA A
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| Protein sequence | MFQMLTNASV QLVNRYLPSP FVFSIVLTLI AFLGGVLLTG QDVLTMAGHW GGGLWSLHSF
AMQMALVLVT GYAFANAPII QRFLDSLASK VTSPTTAIVI STLVGLAGSW INWGFGLVVG
AIFAKSLARK VPNVDYPLLV AAAYSGFVIW HGGFSGSIPL TLSTGGDNLQ TLSGGVLTEA
IPLSQTIFAS YNLIILAALI VVLPIVNRMM HPKNPTTVDP ALIKIEAYVA PETNTPAQKL
DDSRVVAIIL LLLALMYYIN YFSTNGFNLG LDIVIGLFLF IGLMAHGTLE RYYRAVKSGI
GGIAGIVLLF PFYGGIMGIV TGANADGVSI SSEVTEFFVN NATADSFPVF AFLSAGLVNI
FVPSGGGQFA VQGPVMMPAG LALNVSPSVT AMAIAWGDAW TNMIQPFWAL PLLGIAGLDA
RAIMGYCLII LAVSGAIITG GFWLLV
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