Gene PsycPRwf_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1707 
Symbol 
ID5206832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2110362 
End bp2111771 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content45% 
IMG OID640599932 
Productcitrate transporter 
Protein accessionYP_001280597 
Protein GI148653504 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG2610] H+/gluconate symporter and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGCA CACTTGCGAT TATCGTCACT TTATTATTAC TGATGTTTTT TGCCTATCGT 
GGCTACTCAG TTTTAATCTT AGCACCCATC ATGGCCGTCT TGGCGGTCTT ATTATCCGGT
GACTTCTTAA GCAGTATCCC TGCTTACACT GACGTCTTTA TGTCAGCCCT TAGTGGATTT
TTATTAAAAT TTTTCCCAAT ATTTTTATTA GGCGCTTTAT TTGGTCGGCT TATTGCAGAC
TCTGGCGCTG CTACTGCCAT CGCCAATACC GTGGTGAACA AAATGGGTAG CGACAAAGCC
ATTTTGTCGG TCATTATGGT CTGTGCTATT TTGACTTATG GGGGCGTCTC TTTATTCGTG
GTGGCCTTCG CCATTTATCC CATCGCCAAA AACTTGTTTA AAGCGGCAGA CATTCCTAAG
CGCTTGATTC CAGCGGCCAT TGCTTTAGGG TCATTTACTT TTACTATGAC CGCATTGCCT
GGTACCCCTG CCATTCAAAA TGCAATCCCC ATTCCCTACT ACAATACCAA CGTCTTTGCT
GCACCTATCT TAGGTACTAT AGGCGCCGCC ATTATGTTTT TTGCGGGTTG GTATTGGCTA
CAGTTGCGTG CTAATAAAGC CAAGCTTGCT GGTGAAGGGT ACGGGTCACA CGATGATGAT
TTGGAACAAA AAGGCGATAT TGATCACAGC CAAACCAGCC TAGATCATCA AATTTCTTTT
ACAACAGCAA TTATTCCGCT CATATTGGTT ATCGCTTTAA ATGCGTTATT AACTTATGTG
GTCTTTCCAA GCTTAGATTT TAGCGCCCTA CAAGCTCAGT ATCCGGATTT AAATATCCAA
GGATCTCTGG GACTGTGGTC TATTATTATT GCTTTGCTTG TGGCTTGTAC CGCGTTAGTG
ATACTGCGCA TAGGACATTG GCACAACCTA AAAAAATCCA TCAACCGCGG CACTTATGAC
TCGATGCTGC CTATTTTTAA TACCGCCTCG GAAGTCGGCT ATGGGGCAGT GATTGCTTCT
TTGGCAGGCT TTATTATCAT TCGCGATAGT ATTTTGAATC TAACGCCTGA CAATCCACTT
ATCTCTGAAG CAGTGGCGAT GACGACCCTT GCAGGTATCA CGGGCTCTTC TTCAGGCGGT
CTAAGTATTG CACTGTCGAC CTTGGGTGAG AGTTACTACA AAATGGCTTT GGCCACAGGC
ATTGACCCCG AGCTGATGCA CCGCGTTGCA GTTATGGCCG CCGGCGGTCT AGACACCTTG
CCACACAGTG GTGCGGTAAT CACCCTATTG GCCATCTGTG GATTGACTCA CAAACAGTCT
TATCTCAATA TCGCTATGGT AACCATGGGC ATTCCTTTGA TCGCTACCAC AGTGGTGATT
GTATTAGGTA CTTTGTTTGG CTCTTTTTAA
 
Protein sequence
MFSTLAIIVT LLLLMFFAYR GYSVLILAPI MAVLAVLLSG DFLSSIPAYT DVFMSALSGF 
LLKFFPIFLL GALFGRLIAD SGAATAIANT VVNKMGSDKA ILSVIMVCAI LTYGGVSLFV
VAFAIYPIAK NLFKAADIPK RLIPAAIALG SFTFTMTALP GTPAIQNAIP IPYYNTNVFA
APILGTIGAA IMFFAGWYWL QLRANKAKLA GEGYGSHDDD LEQKGDIDHS QTSLDHQISF
TTAIIPLILV IALNALLTYV VFPSLDFSAL QAQYPDLNIQ GSLGLWSIII ALLVACTALV
ILRIGHWHNL KKSINRGTYD SMLPIFNTAS EVGYGAVIAS LAGFIIIRDS ILNLTPDNPL
ISEAVAMTTL AGITGSSSGG LSIALSTLGE SYYKMALATG IDPELMHRVA VMAAGGLDTL
PHSGAVITLL AICGLTHKQS YLNIAMVTMG IPLIATTVVI VLGTLFGSF