Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1695 |
Symbol | |
ID | 5205753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2096542 |
End bp | 2098155 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640599920 |
Product | NADH-quinone oxidoreductase, F subunit |
Protein accession | YP_001280585 |
Protein GI | 148653492 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.316564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACA ACGAAGACGT GCTAACGGCA CAATCTGATC AACCCAAAAA ACTAAGCATT GCCGAGCAGT TTGCTCGCCG CAAGCAAGGT CAAGCCCCCA GTCAATTAAA TAGCCAACGT GTACCTATCT ATGGCGATAA AGCCACAGCG ACTATTGAGA CCAAGCCGTT AACTTGGCGT TTGGCGCACC ATGACGCGAT TTTGGATTTG GCCACTTATC AGTCGCTGCG CGGCTTTGAG GGCTTAAAGA CTGCTTTAGA AAAGGCCCCA AAAGAAGTGG GCGATATGAT CAAAGCGGCT AACGTTCGTG GCCGTGGTGG TGCAGGGTTT AACGCCGGTC TGAAATGGAC CTTTATGACC CCACCAGATG GCGGGCCTCG TTACTTAATT TGTAACGCTG ATGAAATGGA GCCAGGTACT TTCAAAGACC GCTTGCTTAT GGAGCGTCTG CCTTTTCAGC TGATTGAAGG TATGTTAATT ACCGCGCATG CTATTGGCGC AACGGATGGT TATATCTTTA TCCGTGGCGA GTACATTTTA GCAGCAGAGC GCCTAATGGC AGCCATCGAT GAGTGTTTGG CCAATAATCT GATGGGCGAT AATATTCTAG GCTCAGAGTT TAGTTTTAAC TTACACGTGC ACACCGGCGC TGGCCGTTAT ATCTGCGGTG AAGAGACCGC TTTGATTAAC TGTTTAGAGG GTCGTCGTGC CAATCCCCGT ACTAAGCCGC CATTCCCTCA GGTATCAGGG GCTTGGGGCC GACCCACTGT TGTCAACAAC GTGGAAACGC TAAGCAACAT GCCAGCCATT ATGATTAATG GCGTTGAGTG GTACCAGTCT TTACCAAATG AAAAAGGCAA CAGCACCACA CCAGGTACAA AAATATTTGG TTGCTCAGGT CTGGTCAATG ATCCTGGTCT TTGGGAGCTG CCTTTTGGAT ATACGGCTCG AGAGATCATT GAAGACTTCG CAGGTGGTAT GAAAGACGGT AAACGTCTTA AAGCATGGCT ACCTGGCGGG GCATCAACTG ACTTTTTGAC CACAGAGCAT TTAGATGTGG CCATGGATTT TGACAGTATT CAAAAAGCGG GCAGCCGTAT GGGTACAGGT CTGATTATGG TAGTGGACGA AAGCCAAGAT ATGGTGCCTT TGCTTAAAAA CTTGGAGATT TTCTTCCAGC GTGAATCTTG CGGCTTTTGT ACCCCTTGCC GTGACGGCTT GCCTTGGGGC GTGAAGCTGT TAACGGCCAT TGATGATGGC CAAGGTCAGC AAGGTGATGT TGAAAAGCTT GAGGGCTTAA CCCGCGACTT ATGGTTGGGT AAAACTTTTT GTGCGCATGC ACCGGGTGCT ATGGAGCCGC TTATGAGTGC GCTTAAGTAT TTCCGCCATG AGTTTGACAG CAAAATTGTG GTTCCTGCTA TTGAGGTAGA CGCTGAGACG TCACAGTGGG CGGAGTCAGA AATCAAAAAA GTAATGTCAT CTATGGGAAG CGGCAGTCCT GCGGCATCGT CTAATTCAAG CGCAGATACC GGTAGTAACG TTAATTCGGA TACAACAGCA GGCGCAGAAG CCGGGCATAA AACCCTAACT TCTAACCCTA GTGATGTGAA GTAG
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Protein sequence | MSHNEDVLTA QSDQPKKLSI AEQFARRKQG QAPSQLNSQR VPIYGDKATA TIETKPLTWR LAHHDAILDL ATYQSLRGFE GLKTALEKAP KEVGDMIKAA NVRGRGGAGF NAGLKWTFMT PPDGGPRYLI CNADEMEPGT FKDRLLMERL PFQLIEGMLI TAHAIGATDG YIFIRGEYIL AAERLMAAID ECLANNLMGD NILGSEFSFN LHVHTGAGRY ICGEETALIN CLEGRRANPR TKPPFPQVSG AWGRPTVVNN VETLSNMPAI MINGVEWYQS LPNEKGNSTT PGTKIFGCSG LVNDPGLWEL PFGYTAREII EDFAGGMKDG KRLKAWLPGG ASTDFLTTEH LDVAMDFDSI QKAGSRMGTG LIMVVDESQD MVPLLKNLEI FFQRESCGFC TPCRDGLPWG VKLLTAIDDG QGQQGDVEKL EGLTRDLWLG KTFCAHAPGA MEPLMSALKY FRHEFDSKIV VPAIEVDAET SQWAESEIKK VMSSMGSGSP AASSNSSADT GSNVNSDTTA GAEAGHKTLT SNPSDVK
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