Gene PsycPRwf_1695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1695 
Symbol 
ID5205753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2096542 
End bp2098155 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content49% 
IMG OID640599920 
ProductNADH-quinone oxidoreductase, F subunit 
Protein accessionYP_001280585 
Protein GI148653492 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID[TIGR01959] NADH-quinone oxidoreductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.316564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACA ACGAAGACGT GCTAACGGCA CAATCTGATC AACCCAAAAA ACTAAGCATT 
GCCGAGCAGT TTGCTCGCCG CAAGCAAGGT CAAGCCCCCA GTCAATTAAA TAGCCAACGT
GTACCTATCT ATGGCGATAA AGCCACAGCG ACTATTGAGA CCAAGCCGTT AACTTGGCGT
TTGGCGCACC ATGACGCGAT TTTGGATTTG GCCACTTATC AGTCGCTGCG CGGCTTTGAG
GGCTTAAAGA CTGCTTTAGA AAAGGCCCCA AAAGAAGTGG GCGATATGAT CAAAGCGGCT
AACGTTCGTG GCCGTGGTGG TGCAGGGTTT AACGCCGGTC TGAAATGGAC CTTTATGACC
CCACCAGATG GCGGGCCTCG TTACTTAATT TGTAACGCTG ATGAAATGGA GCCAGGTACT
TTCAAAGACC GCTTGCTTAT GGAGCGTCTG CCTTTTCAGC TGATTGAAGG TATGTTAATT
ACCGCGCATG CTATTGGCGC AACGGATGGT TATATCTTTA TCCGTGGCGA GTACATTTTA
GCAGCAGAGC GCCTAATGGC AGCCATCGAT GAGTGTTTGG CCAATAATCT GATGGGCGAT
AATATTCTAG GCTCAGAGTT TAGTTTTAAC TTACACGTGC ACACCGGCGC TGGCCGTTAT
ATCTGCGGTG AAGAGACCGC TTTGATTAAC TGTTTAGAGG GTCGTCGTGC CAATCCCCGT
ACTAAGCCGC CATTCCCTCA GGTATCAGGG GCTTGGGGCC GACCCACTGT TGTCAACAAC
GTGGAAACGC TAAGCAACAT GCCAGCCATT ATGATTAATG GCGTTGAGTG GTACCAGTCT
TTACCAAATG AAAAAGGCAA CAGCACCACA CCAGGTACAA AAATATTTGG TTGCTCAGGT
CTGGTCAATG ATCCTGGTCT TTGGGAGCTG CCTTTTGGAT ATACGGCTCG AGAGATCATT
GAAGACTTCG CAGGTGGTAT GAAAGACGGT AAACGTCTTA AAGCATGGCT ACCTGGCGGG
GCATCAACTG ACTTTTTGAC CACAGAGCAT TTAGATGTGG CCATGGATTT TGACAGTATT
CAAAAAGCGG GCAGCCGTAT GGGTACAGGT CTGATTATGG TAGTGGACGA AAGCCAAGAT
ATGGTGCCTT TGCTTAAAAA CTTGGAGATT TTCTTCCAGC GTGAATCTTG CGGCTTTTGT
ACCCCTTGCC GTGACGGCTT GCCTTGGGGC GTGAAGCTGT TAACGGCCAT TGATGATGGC
CAAGGTCAGC AAGGTGATGT TGAAAAGCTT GAGGGCTTAA CCCGCGACTT ATGGTTGGGT
AAAACTTTTT GTGCGCATGC ACCGGGTGCT ATGGAGCCGC TTATGAGTGC GCTTAAGTAT
TTCCGCCATG AGTTTGACAG CAAAATTGTG GTTCCTGCTA TTGAGGTAGA CGCTGAGACG
TCACAGTGGG CGGAGTCAGA AATCAAAAAA GTAATGTCAT CTATGGGAAG CGGCAGTCCT
GCGGCATCGT CTAATTCAAG CGCAGATACC GGTAGTAACG TTAATTCGGA TACAACAGCA
GGCGCAGAAG CCGGGCATAA AACCCTAACT TCTAACCCTA GTGATGTGAA GTAG
 
Protein sequence
MSHNEDVLTA QSDQPKKLSI AEQFARRKQG QAPSQLNSQR VPIYGDKATA TIETKPLTWR 
LAHHDAILDL ATYQSLRGFE GLKTALEKAP KEVGDMIKAA NVRGRGGAGF NAGLKWTFMT
PPDGGPRYLI CNADEMEPGT FKDRLLMERL PFQLIEGMLI TAHAIGATDG YIFIRGEYIL
AAERLMAAID ECLANNLMGD NILGSEFSFN LHVHTGAGRY ICGEETALIN CLEGRRANPR
TKPPFPQVSG AWGRPTVVNN VETLSNMPAI MINGVEWYQS LPNEKGNSTT PGTKIFGCSG
LVNDPGLWEL PFGYTAREII EDFAGGMKDG KRLKAWLPGG ASTDFLTTEH LDVAMDFDSI
QKAGSRMGTG LIMVVDESQD MVPLLKNLEI FFQRESCGFC TPCRDGLPWG VKLLTAIDDG
QGQQGDVEKL EGLTRDLWLG KTFCAHAPGA MEPLMSALKY FRHEFDSKIV VPAIEVDAET
SQWAESEIKK VMSSMGSGSP AASSNSSADT GSNVNSDTTA GAEAGHKTLT SNPSDVK