| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1688 |
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| Symbol | |
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| ID | 5206582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2086961 |
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| End bp | 2088694 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599913 |
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| Product | NADH dehydrogenase subunit M |
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| Protein accession | YP_001280578 |
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| Protein GI | 148653485 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.694136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAT TTCAATTAGC TTGGATGTTG CCAGCATTGA TTGCAACCCC GTTCATTGCG
GGTACGCTGT GCTGGTTAGT AGAGAAAATT AATAATCGTC TGCCACGCTG GATTGCTTTG
ATCGGCATGA TCATCACCTT TGGCTTAAGC TTGGTTTTAT GGCGTGAAGG CGCCTTTGCC
GGTATGAGCC AGCAAGTGTT GGCACCGACT GCTCAATTGC CTTGGTTTGC AGAGTTTAGT
GTGCCTTGGA TTGAGTCATT TGGTATCAGC TTCCACTTAG CGCTTGATGG TATGTCACTG
CTTATGGTCT CACTGACTGC CTTCCTAGGT ATCATGGCCG TGGGCTGTTC ATGGGGTGAG
ATTCAACGCC GCGTGGGCTT TTTTCATCTG AACCTGTTAT GGAGCTTGGG CGGGGTAATC
GGGGTGTTTT TGGCCATCGA CTTATTCTTG TTCTTCTTCT TCTGGGAGAT GATGTTAGTT
CCTATCTATT TCCTAATTGC CATCTGGGGC CACAATGCCA CCAATGGTAA GACCAAAGAA
TACGCAGCCA CCAAGTTCTT TATTTACACC CAAGCTTCTG GTCTCATTAT GTTGATTGGT
ATCTTATTAT TGGTACTGAT GAACTACCGC AGCTCCGGCG TATTTAGCTT TAACTACAAT
GACTTGTTGG GGACACCGCT GGGTGGTTGG GAATATCCCA TCATGCTGTG CTTCTTTATC
GGTTTTGCAG TTAAGCTGCC TGTTATGCCC TTTCATGGCT GGTTGCCCGA TGCGCATGCT
CAGGCACCGA CAGCAGGTTC TGTGGACTTA GCCGGTATCT TAATTAAGAC AGCCGCTTAT
GGTTTGATCC GCTTTGTCTT GCCATTATTC CCAGAAGCCT CACAGCAATT TGCACCTATC
GCTATGACCT TAGGGGCCAT CGGTATCTTC TATGGCGCTT GGCTTGCCTT TATGCAAACT
GATATTAAGC GTCTATTGGC TTATACCAGT GTCTCGCACA TGGGCTTTGT TATTTTAGCT
ATTTATGCCG GTACCTTAAT CAGCTTACAA GGCTTGATGG TACAGATGTT GGCGCATGGC
TTGTCTTCTG CTGCGCTATT TATCATGGCC GGTCAGTTAT ACGAGCGTTT ACATACCCGC
GAGCTGCCTT TAATGGGCGG TATGTGGGGA CAGTTCCGCT ACTACGCGCC GCTGCTGATG
TTCTTTTGTG CCTCACTGCT GGGTATTCCA GGTACAGGCA ACTTCATCGG TGAGATCCTA
ATTTTGTTAG GTGCCTTTGA GCAGTATCCT GTATTTGTTA TCTTAGCGAC ATTTAGTTTG
GTATGGGCAG GTTTATATTC ACTACTTATC ATTTACCGTG CTTTATTTGG TGAAAAAACC
GTACCTGAAA CCGCTGTAGC AAAAACCGCT CAGTCTGTTG CTGCTAAGGC GCAACTTGCT
AAGGCGACTT ATGCGACAGC CACGCCTGCA GGCCATAAGA TTAATCACAG TTATGAAGAA
GAAGTGCCTG CTGACAAATC AGTTAAGCTA CATGATTTAA ACAAGCGCGA GCTGACTTTG
CTGTTGGTAC TGGCAATCGG TCTAGTGTGG TTGGGCTTAT ACCCACAACC TGTTTTGGAC
ACCTCCAGCC ATGCCATGCA GTGGATTAAT AATGCTTATA CTTATCATGA AGTTGTGAAT
TTTGATGTCA TAGATTCAGT CCAATCAGCA GTTGCCACAG GGGAGGTACG TTAA
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| Protein sequence | MTEFQLAWML PALIATPFIA GTLCWLVEKI NNRLPRWIAL IGMIITFGLS LVLWREGAFA
GMSQQVLAPT AQLPWFAEFS VPWIESFGIS FHLALDGMSL LMVSLTAFLG IMAVGCSWGE
IQRRVGFFHL NLLWSLGGVI GVFLAIDLFL FFFFWEMMLV PIYFLIAIWG HNATNGKTKE
YAATKFFIYT QASGLIMLIG ILLLVLMNYR SSGVFSFNYN DLLGTPLGGW EYPIMLCFFI
GFAVKLPVMP FHGWLPDAHA QAPTAGSVDL AGILIKTAAY GLIRFVLPLF PEASQQFAPI
AMTLGAIGIF YGAWLAFMQT DIKRLLAYTS VSHMGFVILA IYAGTLISLQ GLMVQMLAHG
LSSAALFIMA GQLYERLHTR ELPLMGGMWG QFRYYAPLLM FFCASLLGIP GTGNFIGEIL
ILLGAFEQYP VFVILATFSL VWAGLYSLLI IYRALFGEKT VPETAVAKTA QSVAAKAQLA
KATYATATPA GHKINHSYEE EVPADKSVKL HDLNKRELTL LLVLAIGLVW LGLYPQPVLD
TSSHAMQWIN NAYTYHEVVN FDVIDSVQSA VATGEVR
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