| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1679 |
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| Symbol | |
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| ID | 5205606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2077219 |
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| End bp | 2077896 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599904 |
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| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
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| Protein accession | YP_001280569 |
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| Protein GI | 148653476 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000648781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGCAG TTTCCACATT TTTTAAGCGT TTGTTTGGGG CCCTGGTATT ATTGGCAGTG
GCCTTTTATA TTTCTGTAGC GGGTCTGCTG ATGGTCTGGA AAAGTCAGCC CATTAATAAC
AGCATGTTTA TGATTGCCCA CCGCTTAGGG GGTGGCAGCG TGACCCAAAC TTGGGTAGAG
TATGAAGATA TCGCCAAGTC TGCTAAGCGA GCCGCTATTG TCAGTGAAGA TTCTCGATTT
GCCAGCCACA ACGGCTTTGA TATGGAAGGT ATCGAGGCGG CCATGAAAAA AAATGAAAGC
TCAGGCACAG TGGCAGCTGG CGGATCAACC ATCACTCAGC AGCTTGCCAA AAACTTATTT
TTGACCTCGC ACCGCTCATA TGTGCGTAAA GGACTTGAGG CAAGTATTAC CTTAATGATA
GAGGGGATGT GGGACAAACA GCGTATCTTA ACCGCTTATT TAAATGTGGC CGAATTTGGT
AATGGCATCT ATGGCATTGA GGCGGCTGCG CATCACTATT TTAATAAGCC GGCAAGCAAG
CTCAATCGAG ACGAATCGGC GCTGCTGATT AGCATGCTCA CCAATCCCAA GTATTATCAA
GGACATATGA GCGATAAGCG TCTGCGCAAT AAGCAGCGTA TTATCATGCG CCGTATGAAC
AATGCAGTTT TGCCCTAA
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| Protein sequence | MTAVSTFFKR LFGALVLLAV AFYISVAGLL MVWKSQPINN SMFMIAHRLG GGSVTQTWVE
YEDIAKSAKR AAIVSEDSRF ASHNGFDMEG IEAAMKKNES SGTVAAGGST ITQQLAKNLF
LTSHRSYVRK GLEASITLMI EGMWDKQRIL TAYLNVAEFG NGIYGIEAAA HHYFNKPASK
LNRDESALLI SMLTNPKYYQ GHMSDKRLRN KQRIIMRRMN NAVLP
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