Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1656 |
Symbol | |
ID | 5205346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2048272 |
End bp | 2049642 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640599879 |
Product | MATE efflux family protein |
Protein accession | YP_001280546 |
Protein GI | 148653453 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.737178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTCTA ATTTATCTTT TTCTGAGTTT AAACAGCACA GTTTACGCTT AGGTACCTTA GTTCTTCCCA TCTTAATTAC TCAGTTTTGT CAGGCAGCGT TAGGCGTAGT CGATGCGCTG ATGGCCGGCG GCGTTTCTGC TCTAGACTTG GCAGCAGTGT CCATTGGCTC AGGTATTTGG CTGCCTTTGT TCTTGTTAGC CACAGGGACT TTGATTGCTA CCACACCACT GATTGGCGAA AAGATGGGGG AAAAACTGCC CCATCACGTA CCACATATCA CTCAGCAGTC CTTGTGGGCA GCATTATTTA TTGGCGCCAT TGGCCTGGTA GTGGTGTCCT TTACGCCTAA TATTCTAGGC CCTATGGGCG TGCCAGCCGA TATTCAGCCT AAGGCAGCGC AATATCTACG CTTCGTAGCT TGGGGCTTTC CTGCTATTGC CTGCTATGCG GTACTGCGCA GCTATTGTGA GGCGCTCGGT AGACCTGAGC CGGTCACTAT TATCAGCTTA ATTGGCTTAT TTATTAATAT TCCAATCAAC TACATCTTTA TCCACGGTTT ATTTGGCATG CCAGAGCTTG GTGGCGCAGG CTGTGGTCTG GCTACCGCTT GTGTGCTGTG GATTAATGTC ATCTTACTAT CTATTTATTT GTTTTTCTCG AAGCACACAA CCTTTGATGA GACCCGCTTC TTTTACAACT TCGCCAAACC TGATCGTCAG CAAATCGGTA AGCTGTTTCG CTTAGGTGTC CCCATTGGCA TCTCGATATT TTTTGAGGCA AGTTTATTTA GTCTGGCCTC TATCGTAATT AGCCCCTTGG GTGCAGTGGC TGTGGCCTCT CACCAAGTGG CACTGGCGGT GACCTCTCAG CTGTTTATGA TTCCGATGTC AGTGGCGATG GGTCTTACCA TTATGGTCTC TAATCGCTAT GGCGAGAAAA ACTGGCTGGC CTTACAGCAA GTGCAGCGCA CGGGACTGAT TTGGACCGTG GGTATCGCGT TGGTGAGTAT GCTTGGGGTA TGGTTGTTCC GTGAGAACTT AGCCGATGCC TTTACCGATA ATCCGGCCGT AAAAGCACAA GCGATGTATT TATTGCTATT TGCCATTGCC TATCAATTGG TAGATGGATG GCAGGTCAAC ATAGCGGGTA TCTTACGCGG TATGCAAGAC ACACAAGTGC CGATGTGGAT CACTTTATTT TGTTATTGGC TGGTGGCTTT ACCATTAGGA ACCTATTTGG TTCGTTATAC CGACACAGGT GCACAAGGAT TTTGGATGGC ATTGGTCACT GGCCTGAGTT TATCTTCGGT GTTATTGACA TTAAGGCTAA TTTATCGTCA GCGCCAAGTT TTGAGCATAC CTGCGCGCTA G
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Protein sequence | MLSNLSFSEF KQHSLRLGTL VLPILITQFC QAALGVVDAL MAGGVSALDL AAVSIGSGIW LPLFLLATGT LIATTPLIGE KMGEKLPHHV PHITQQSLWA ALFIGAIGLV VVSFTPNILG PMGVPADIQP KAAQYLRFVA WGFPAIACYA VLRSYCEALG RPEPVTIISL IGLFINIPIN YIFIHGLFGM PELGGAGCGL ATACVLWINV ILLSIYLFFS KHTTFDETRF FYNFAKPDRQ QIGKLFRLGV PIGISIFFEA SLFSLASIVI SPLGAVAVAS HQVALAVTSQ LFMIPMSVAM GLTIMVSNRY GEKNWLALQQ VQRTGLIWTV GIALVSMLGV WLFRENLADA FTDNPAVKAQ AMYLLLFAIA YQLVDGWQVN IAGILRGMQD TQVPMWITLF CYWLVALPLG TYLVRYTDTG AQGFWMALVT GLSLSSVLLT LRLIYRQRQV LSIPAR
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