| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1640 |
|---|
| Symbol | rpsF |
|---|
| ID | 5205897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2028050 |
|---|
| End bp | 2028454 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640599861 |
|---|
| Product | 30S ribosomal protein S6 |
|---|
| Protein accession | YP_001280530 |
|---|
| Protein GI | 148653437 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0360] Ribosomal protein S6 |
|---|
| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0507943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0355259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACATT ACGAAGTGGT GCTTATCGTA CACCCTGACC AAAGCGACCA AGTAGTCGGA
ATGGTTGAGC GATATATCAA ATTAGTTCAA GACAACAATG GTATGGTTCA TCGTCTTGAA
GATTGGGGCC GTCGTCAATT GGCTTACCCA ATTAACAAAA TCCATAAAGC ACACTATGTT
TTATTCAACA TCGAGTGTGA TGGTGCAACT CTAGAAGAGC TTGAAGAGCT ATTCCGTTAC
AACGACGCTA TCATCCGTAG CTTAGTTGTT CGTCGTGACG ACGCTATTAC TGAACCTTCA
CAATTAGCAA AAAGTGCTGA TGAGAAGCGT GCCCGTAAAG CTCCACGTAG CGAAAACTTT
GACAACGATC AGGATGATGA GTCTAACGAC GATTCTGACG AATAA
|
|---|
| Protein sequence | MRHYEVVLIV HPDQSDQVVG MVERYIKLVQ DNNGMVHRLE DWGRRQLAYP INKIHKAHYV
LFNIECDGAT LEELEELFRY NDAIIRSLVV RRDDAITEPS QLAKSADEKR ARKAPRSENF
DNDQDDESND DSDE
|
|---|
| |