| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1624 |
|---|
| Symbol | purH |
|---|
| ID | 5205092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2009136 |
|---|
| End bp | 2010710 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640599846 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_001280515 |
|---|
| Protein GI | 148653422 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000543394 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000000591823 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATA AGCCGTACGC TCTTATTTCT GTTTCTGATA AATCACAAAT TGAAAGCTTT
GCAAAAGGCC TCATCGAAGC AGGATACGAT CTATTATCTA CCGGTGGTAC GTATCGCCTA
CTGTCTGACA ACGGCATTGC TGTGACTGAA GTGGCCGACT ATACCGGCTT CGCCGAAATG
ATGGATGGCC GCGTCAAAAC CTTACACCCA AAAATTCATG GTGGTATTCT CGGTCGCCGT
GGTCAAGACG ATGCGGTTAT GAGCGAACAT GGTATTCGCC CTATCGACTT AGTCGTGGTC
AACCTTTATC CTTTTGCGCA AACTGTGGCA AAGCCTGATG TGACCAAAGC TGATGCGATT
GAAAACATCG ATATCGGTGG CCCAACCATG GTGCGCTCAG CGGCCAAAAA CCACGAACAT
GTAGCCATCG TAACCAATCC TGCAGACTAT GATGTGGTGC TACAAGAGCT AAAAGACACG
GGCAGCATCT CTCAAAAAAC CCGTTTTGAT TTGGCAGTAA AAGCGTTTGA GCATACCGCT
CATTATGATG GCATGATTGC CAACTTCTTA GGCAGTCGCC TAGAGTCATT TGAAGCGCCA
GATAGCTTCG CTCGCACGTT CAACGTACAA CTACAAAAAG CTCAAGATTT GCGCTATGGT
GAAAACCCAC ATCAAAAAGC GGCATTTTAT GTAGAAGCCA ATGGCTCAGG TGAAGGCAGC
ATCTCTACCG CTCAGCAGCA TCAAGGCAAA GAGCTGTCAT ACAACAACAT CGCTGATACT
GATGCCGCTT TAGAGTGTGT CAAATCATTT AGCGAGTCGG CCTGTGTGAT TGTGAAGCAC
GCGAACCCTT GCGGTGTGGC GATCAATGCT GACCAGACTC AAGCATACAA AACAGCGTTT
AGCACAGATC CTGAGTCATC TTTTGGCGGT ATCATTGCCT TTAACCGTCC CCTAACTAAG
CAAACGGCGC AAGCGATTGT AGATACGCAG TTCGCTGAAG TGATCATTGC CCCAAGCCTT
GAGCAAGGTG TGCTTGACAT TACTGCCGCC AAAAAGAACG TACGCGTCTT AACCTGTGGT
GAGCTACCAA GCCCTGATCA ACGTGCCGCG CAATTTGACT ATAAACGTGT CACAGGCGGT
CTATTAATCC AAAACCAAGA CTTGGGTCTC ATCACTGCCG ATGACCTACA AGTGGTGACT
GATCTAAAAC CTACTGCTGA GCAGTTAAAT GACTTATTGT TCACTTGGAC TGTGGCCAAG
TATGTTAAGT CAAATGCCAT TGTTTATGGT AAAGATCAGC GCACCATCGG TATTGGTGCC
GGCCAAATGA GCCGTGTGAA CTCAGCACGT ATCGCAGCCA TCAAAGCTGA GCATGCCAAC
CTAGCAACGC AAGGCGCGGT TATGGCCTCA GATGCCTTCT TCCCATTCCG TGATGGTATC
GATAACGCTG CTGAAGTAGG CATTAAAGCC ATTATTCAGC CCGGTGGTTC TATTCGTGAT
GACGAAACCA TTGCTGCGGC GAACGAGCAT GGTATCGCTA TGGTCTTCAC CGGTATGCGT
CATTTCCGCC ACTAA
|
|---|
| Protein sequence | MSDKPYALIS VSDKSQIESF AKGLIEAGYD LLSTGGTYRL LSDNGIAVTE VADYTGFAEM
MDGRVKTLHP KIHGGILGRR GQDDAVMSEH GIRPIDLVVV NLYPFAQTVA KPDVTKADAI
ENIDIGGPTM VRSAAKNHEH VAIVTNPADY DVVLQELKDT GSISQKTRFD LAVKAFEHTA
HYDGMIANFL GSRLESFEAP DSFARTFNVQ LQKAQDLRYG ENPHQKAAFY VEANGSGEGS
ISTAQQHQGK ELSYNNIADT DAALECVKSF SESACVIVKH ANPCGVAINA DQTQAYKTAF
STDPESSFGG IIAFNRPLTK QTAQAIVDTQ FAEVIIAPSL EQGVLDITAA KKNVRVLTCG
ELPSPDQRAA QFDYKRVTGG LLIQNQDLGL ITADDLQVVT DLKPTAEQLN DLLFTWTVAK
YVKSNAIVYG KDQRTIGIGA GQMSRVNSAR IAAIKAEHAN LATQGAVMAS DAFFPFRDGI
DNAAEVGIKA IIQPGGSIRD DETIAAANEH GIAMVFTGMR HFRH
|
|---|
| |