Gene PsycPRwf_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1613 
Symbol 
ID5206715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1995520 
End bp1995765 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content42% 
IMG OID640599835 
Productcarbon storage regulator 
Protein accessionYP_001280504 
Protein GI148653411 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000487274 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000608552 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAATTT TAACTCGCCG TGTGGGTGAA ACTTTAATGG TTGGTGACGA GGTAAGTGTC 
ACTGTATTGG GCGTTAAGGG CAATCAAGTT CGTATTGGGG TTAATGCACC CAAAGATATC
GCGGTGCACC GTGAAGAGAT TTATCAGCGC ATTCAACATG AGCGTGCTAT GCAGTCTCAA
ATGCAGCATT TAGAACAAGG TAACTTCCCT ACCTCATTCG ATGATGACGA TTTTTTTAAT
AGATAG
 
Protein sequence
MLILTRRVGE TLMVGDEVSV TVLGVKGNQV RIGVNAPKDI AVHREEIYQR IQHERAMQSQ 
MQHLEQGNFP TSFDDDDFFN R