Gene PsycPRwf_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1590 
Symbol 
ID5205595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1956912 
End bp1957721 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content45% 
IMG OID640599812 
Producturacil-DNA glycosylase 
Protein accessionYP_001280481 
Protein GI148653388 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000051966 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000589305 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTATACA ATGGGCGCTA TGATACATTT GATTGCCCAT ACCTAAAACA AATTAAAAAA 
GAGTCTACTA TGTCATTAGT GAATGAGCCC AAAGGCCAAA AAAGTGCAGC CGAGAAGCAG
GCCATTTTAG CCAAAGTTAA GATGCCAGAG GACTGGAAAC AGGCCTTAGC AGATGAGTTG
ACCTCGGATA ATATGGACAA TCTGCGTGAC TTTTTACGTC AAGAGTATGG CTCTGGCAAA
AGTATATATC CCAAAGCCAG CCAAATGTTT AATGCCTTTA ATTTAACCCC GCTATCGCAA
GTTAAGGTAG TGATATTAGG TCAAGATCCT TACCATGGCC CAGGTCAGGC AATGGGGCTG
TCGTTTTCGG TGCCGAAGAT GATTCCGATG CCGCCCTCCT TACGCAATAT TGTTAAAGAA
ATGGCCGATG ATATTGGTAC AGTCCCGCCT AAGCATGGGG ATTTAACCAA TTGGGCAAAG
CAAGGTGTCC TACTATTAAA TGCCTCGTTG ACCGTAGAAG AGGGCATGGC AGGCAGTCAT
CAGGGTAAAG GTTGGGAGCA GTTTACCGAT GCGGTCATTG ATGTGGTCAA TCAGCAGACC
AATAATACGG TCTTTATCTT GTGGGGCAGC AAAGCCAAAC TTAAAGGAAA GTTCGTTGAC
ACTGATAAGC ATTTGGTGCT CTCTGCGGTG CACCCTTCAC CTTTAGCGGC CAATAGAGGT
GGTTTTTTTG GCAGCAAGCC TTTTTCAAAA ACCAATGATT ATTTGCAGCA GCATGGCAAG
ACTCCCATTG ATTGGCAATT ACCGCAATAA
 
Protein sequence
MLYNGRYDTF DCPYLKQIKK ESTMSLVNEP KGQKSAAEKQ AILAKVKMPE DWKQALADEL 
TSDNMDNLRD FLRQEYGSGK SIYPKASQMF NAFNLTPLSQ VKVVILGQDP YHGPGQAMGL
SFSVPKMIPM PPSLRNIVKE MADDIGTVPP KHGDLTNWAK QGVLLLNASL TVEEGMAGSH
QGKGWEQFTD AVIDVVNQQT NNTVFILWGS KAKLKGKFVD TDKHLVLSAV HPSPLAANRG
GFFGSKPFSK TNDYLQQHGK TPIDWQLPQ