Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1590 |
Symbol | |
ID | 5205595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1956912 |
End bp | 1957721 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640599812 |
Product | uracil-DNA glycosylase |
Protein accession | YP_001280481 |
Protein GI | 148653388 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000051966 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000589305 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTATACA ATGGGCGCTA TGATACATTT GATTGCCCAT ACCTAAAACA AATTAAAAAA GAGTCTACTA TGTCATTAGT GAATGAGCCC AAAGGCCAAA AAAGTGCAGC CGAGAAGCAG GCCATTTTAG CCAAAGTTAA GATGCCAGAG GACTGGAAAC AGGCCTTAGC AGATGAGTTG ACCTCGGATA ATATGGACAA TCTGCGTGAC TTTTTACGTC AAGAGTATGG CTCTGGCAAA AGTATATATC CCAAAGCCAG CCAAATGTTT AATGCCTTTA ATTTAACCCC GCTATCGCAA GTTAAGGTAG TGATATTAGG TCAAGATCCT TACCATGGCC CAGGTCAGGC AATGGGGCTG TCGTTTTCGG TGCCGAAGAT GATTCCGATG CCGCCCTCCT TACGCAATAT TGTTAAAGAA ATGGCCGATG ATATTGGTAC AGTCCCGCCT AAGCATGGGG ATTTAACCAA TTGGGCAAAG CAAGGTGTCC TACTATTAAA TGCCTCGTTG ACCGTAGAAG AGGGCATGGC AGGCAGTCAT CAGGGTAAAG GTTGGGAGCA GTTTACCGAT GCGGTCATTG ATGTGGTCAA TCAGCAGACC AATAATACGG TCTTTATCTT GTGGGGCAGC AAAGCCAAAC TTAAAGGAAA GTTCGTTGAC ACTGATAAGC ATTTGGTGCT CTCTGCGGTG CACCCTTCAC CTTTAGCGGC CAATAGAGGT GGTTTTTTTG GCAGCAAGCC TTTTTCAAAA ACCAATGATT ATTTGCAGCA GCATGGCAAG ACTCCCATTG ATTGGCAATT ACCGCAATAA
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Protein sequence | MLYNGRYDTF DCPYLKQIKK ESTMSLVNEP KGQKSAAEKQ AILAKVKMPE DWKQALADEL TSDNMDNLRD FLRQEYGSGK SIYPKASQMF NAFNLTPLSQ VKVVILGQDP YHGPGQAMGL SFSVPKMIPM PPSLRNIVKE MADDIGTVPP KHGDLTNWAK QGVLLLNASL TVEEGMAGSH QGKGWEQFTD AVIDVVNQQT NNTVFILWGS KAKLKGKFVD TDKHLVLSAV HPSPLAANRG GFFGSKPFSK TNDYLQQHGK TPIDWQLPQ
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