| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1559 |
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| Symbol | |
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| ID | 5204758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1911917 |
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| End bp | 1913146 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599781 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) |
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| Protein accession | YP_001280450 |
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| Protein GI | 148653357 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000118644 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000049747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCTTCTT TTGCCGCACC AAGCTTAGAG CTGTCCGCTT CAAGCGCTTC TTTGTATCCT
CTTACCCAGC CATCGCAGGA TGATACCGGC GAGTATCGGC CGCTGCGTGT TGCGATTAAT
GGGTTTGGTC GTATTGGCCG TAATGTACTG CGCGCTTTAC TTGAGCGCTT TGAGGTACTG
GGCAAATTGG TACACATTGT GGCCATCAAT GATGTGGCCG ATGTCGATAC ATTGCTGCAT
TTATTACAAT TTGACAGCAC CCATGGCCGA TTAAGCCGAT TGGGGGTGAG TGCCAGTATC
AAATCAATTG ATAAAAATAT TGATGTAAGC GGTGAGGCGC TGAGCGCTGA GGCCAATCAT
CACGCCACTA ATATCAATAG CGCCCATTTA GCCAATCAGT TGTGTTTATC CAAAAACAAC
ACCACGTATT GTATTGACCT CTTAAGTACC GAACAGCCGG AGCACTTGCC GTGGAACGCA
CTGAGTGTGG ATGTGGTATT AGAGTGTACC GGTCATTTTC GATCGTATGA AGATGCCAGT
CGCCATTTAA CTGCTGGCGC CAAGCAGGTC ATTGTGGGCG CTGCACCTTT TGATAAGGTC
GATGCCAGTA TCGTGATGGG TGTCAATGAT GCTGAGCTGA CGCGTGATTT GCCCATTATC
TCCAGTGTCT CTTGCACCAC TCAGGCGTTG GTACCGCTAA TTTATGTGCT AGATAAAGCC
TTTGGTACGC AGTCGGTAAT GATGACTGAA ATCCATGCGG TCACGGCCGA TCAAAACGTA
TTAGATCAGC CACATCGAGA CAAGCGTAGG GCGCGCGCTT CAGGGCACAA TATTATTCCT
ACTACCTCAA GCAGCATTGC TGCCACCGAG CGCACTTTAC CGCATATGTT GGGCAAAATT
AATGGTCATT CGATACGGGT ACCAACCATT GATGTCGCCG CTATTGATGT CAATTTAGTC
TTTGATACAA GTGTCAGCTT AGAGGAGGTG AGAGCGGTGC TAAAAGCTGC GTGTGAGCCA
GGCAGTAGCC TATATGGCAT TATGGGCTAT ACTGACCTAC CCTTAGTCTC CAGCGACTTT
ATACATCAGG CTGAGTCACT GATCATAGAT GGCCAGCAGC TAATGCAAGT GGGGAGTCAG
GTTAAGGTCT TTGCCTGGTA CGACAATGAG TGGGGTTATG CCAATCGCTT GTTAGACATG
TGTTTGCATT TGCAGCAAGC ACGCCCGTAA
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| Protein sequence | MSSFAAPSLE LSASSASLYP LTQPSQDDTG EYRPLRVAIN GFGRIGRNVL RALLERFEVL
GKLVHIVAIN DVADVDTLLH LLQFDSTHGR LSRLGVSASI KSIDKNIDVS GEALSAEANH
HATNINSAHL ANQLCLSKNN TTYCIDLLST EQPEHLPWNA LSVDVVLECT GHFRSYEDAS
RHLTAGAKQV IVGAAPFDKV DASIVMGVND AELTRDLPII SSVSCTTQAL VPLIYVLDKA
FGTQSVMMTE IHAVTADQNV LDQPHRDKRR ARASGHNIIP TTSSSIAATE RTLPHMLGKI
NGHSIRVPTI DVAAIDVNLV FDTSVSLEEV RAVLKAACEP GSSLYGIMGY TDLPLVSSDF
IHQAESLIID GQQLMQVGSQ VKVFAWYDNE WGYANRLLDM CLHLQQARP
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