| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1541 |
|---|
| Symbol | |
|---|
| ID | 5205443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 1886498 |
|---|
| End bp | 1886968 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640599759 |
|---|
| Product | Ferritin, Dps family protein |
|---|
| Protein accession | YP_001280432 |
|---|
| Protein GI | 148653339 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00103118 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCA ATCAAATCGG CCTAGAAAAA AAAGACATGT CAGCTGTCAT CGATAAACTA
AACAATCTAT TGTCAAGCTA CCATGTATTT TATATTAATG TGCGTGGCTA CCACTGGAAC
GTAAAAGGCG AGCACTTCTT CTCACTACAT CAAAAATTTG AAGAGCTATA TACCAGCTTA
CAACTTCAAA TCGACGAAAT CGCTGAACGT GTATTAACTC TAGGCGGTAC GCCACTACAT
GCCTATAGCG ACTTTGCTCA GCACAGCAGC ATCAAAGAGC ACAAAAACGT CTTTAACGGC
AAAGAATGCG TTAAAGGTCT GGTAAGTGGT TTACAAGAGC TTATTGAAGA GCAGCGCCAA
GTATCTGCAG TAGCAGAAGA AGCTGAAGAC CAAGGTACCG CTGATTTAGT GGATGAGTAT
GTACAGCAGC AAGAAAAACT GGTTTGGATG TATAACGCTT TCTTAGGCTA A
|
|---|
| Protein sequence | MTTNQIGLEK KDMSAVIDKL NNLLSSYHVF YINVRGYHWN VKGEHFFSLH QKFEELYTSL
QLQIDEIAER VLTLGGTPLH AYSDFAQHSS IKEHKNVFNG KECVKGLVSG LQELIEEQRQ
VSAVAEEAED QGTADLVDEY VQQQEKLVWM YNAFLG
|
|---|
| |