| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1539 |
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| Symbol | |
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| ID | 5205441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1883643 |
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| End bp | 1884929 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599757 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001280430 |
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| Protein GI | 148653337 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000020455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATC CTAAGTTATT ACGCCAAGAT TTAACTGAGC TAAAACAGAA GCTTGCCAAG
CGTGGCTATG AGCTGGATGT GGATTTTTGG CAACAGATGG AGTCGCAGCG CAAATCGCTT
CAGGTGATCA CCGAAGACTT ACAGGCCAAG CGTAATGCTG GGGCTAAGCA AGTGGGTGTG
CTCAAGAAAA ATGGGGAAGA TGCCACTGAG CTACTGGCTG AGATGCAAAA TATCAGCAGC
GAGATGAAAC AGGCTGAAGA GTCGCTAAAA GCGCTACAAG ACAAGATTAA TCAAGCGGCA
TTACAAATCC CAAATATTCC AGCCGATGAC GTGCCAGAGG GCAGCTCTGA AGAGGATAAC
GTTGAAGTGC GTAAATGGGG CACGCCGCGT CAGTTCGACT TTAAGGTCCA AGAACACAGC
GACTTAGGCG AGGTTTTGGG TCAATTAGAC TTCGCTGCTG CTGCTAAGCT AACGGGTAGC
CGCTTTAGCG TATTAAAGGG TCAATTGGCA CAATTACACC GCGCCCTTAT CCAGTTTATG
CTCAACACGC ATACCGTAAA ATACGGTTAT ACCGAGTGTT ATGTCCCATA TATCGTCAAC
TCAGATAGCT TAGAGGGTAC TGGCCAGCTG CCAAAATTTG AAGAAGATTT ATTTAAGCTG
ACCAACCACA CCAACAATGA GGCAATGGGA TTTTATCTGA TCCCAACCGC TGAAGTGCCT
ATGACCAACT TGGTACGTGG TGAGCGTCTA GATGCCAGTG AGCTGCCGCT AAAATTCACC
GCACATACCC CTTGCTTTAG AAGTGAGGCC GGCTCGCATG GTCGTGACAC CCGTGGCCTT
ATCCGTCAGC ATCAGTTTGA AAAGGTGGAG ATGGTCAATA TCGCTACCGC TGCACAATCT
GATGAGCTGC TTGAGCAAAT GACTGGCCAA GCTGAGTATA TCTTGCAGCA ATTACAGCTG
CCGTATCGGG TGGTTAAGTT GTGTACTGGC GATATGGGGT TTAGCGCCCT GCGTACTTAT
GACATCGAAG TGTGGGTACC TAGCCAAGAT ACTTACCGTG AAATCTCAAG CTGTTCAAAC
TGTGGTGACT TCCAAGCCCG CCGCATGGGT ACCCGTGTAA AAGAAGGCAA AAAAACTGAA
CTTGTACACA CCCTAAATGG CTCTGGGCTT GCTGTGGGCC GCACCTTATT GGCGATTATG
GAAAACCATC AAAACGCGGA TGGCAGCATC ACCATTCCAG AAGTACTGCG TCCTTATATG
GGCGGTGCTG AGATTATTTC AGCCTAA
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| Protein sequence | MIDPKLLRQD LTELKQKLAK RGYELDVDFW QQMESQRKSL QVITEDLQAK RNAGAKQVGV
LKKNGEDATE LLAEMQNISS EMKQAEESLK ALQDKINQAA LQIPNIPADD VPEGSSEEDN
VEVRKWGTPR QFDFKVQEHS DLGEVLGQLD FAAAAKLTGS RFSVLKGQLA QLHRALIQFM
LNTHTVKYGY TECYVPYIVN SDSLEGTGQL PKFEEDLFKL TNHTNNEAMG FYLIPTAEVP
MTNLVRGERL DASELPLKFT AHTPCFRSEA GSHGRDTRGL IRQHQFEKVE MVNIATAAQS
DELLEQMTGQ AEYILQQLQL PYRVVKLCTG DMGFSALRTY DIEVWVPSQD TYREISSCSN
CGDFQARRMG TRVKEGKKTE LVHTLNGSGL AVGRTLLAIM ENHQNADGSI TIPEVLRPYM
GGAEIISA
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