Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1536 |
Symbol | |
ID | 5205438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1878993 |
End bp | 1880189 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640599754 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001280427 |
Protein GI | 148653334 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAAGTA ATGCCCACGC TACCCACAGA TCTACTTTTG AATGGTCAGA TCCTTTTTTA TTACATGACC AACTCACAGA AGAAGAGCAG ATGGTGCAAA GATCGGCGCA TGATTTTTGT CAAAGCGAGC TTATGCCAGG AATTTTACAG GCCAACCGTC ATGAGAATTT TGACCGCAAT ATTATGCGTC AAATGGGCGA GCTGGGTCTG CTTGGCGTTA CCATTGACGG GTATGGTTGT GCCGGATTAT CGAGTGTGGC TTATGGTGTT ATTGCCAAGG AAGTAGAGGC AGTCGACTCA GGCTACCGCT CCGCCATGAG TGTGCAGTCA AGCCTAGTGA TGCATCCCAT CTGGGCATAC GGCACAGAGG CACAAAAAGA AAAGTACCTG CCCAAACTGG CAACAGGTGA GTATGTGGGC TGCTTTGGCT TAACCGAACC TGACGCTGGC TCAGATCCTG GCTCAATGAA AACTCGTGCC AAAAAAGTAG ATGGTGGCTA TCAACTTAAA GGCAGCAAAA TGTGGATTAC CAACAGTCCG ATTGCCGATG TCTTCGTGGT ATGGGCCAAA GATGATGAGG GTGAAATCCG CGGCTTTGTA TTAGAAAAAG GCATGAAAGG CTTATCAGCA CCTAAAATTG AAGGCAAATT CTCGCTGCGC GCCTCTATCA CTGGTGAAAT CGTGATGGAT GATGTGTTTG TCCCTGAAGA AAATGCTTTT CCAGACATTC GTGGTCTAAA AGGGCCGTTT GGTTGCCTAA ACAAAGCCCG TTATGGCATT GCTTGGGGCT CAATGGGCGC AGCTGAGTTT TGCTGGAAAG CGGCCCGCCA ATATACCCTA GATCGCAAAC AGTTTAACCG TCCTTTAGCC GCCACTCAAT TGGTACAGCT AAAGCTTGCC GATATGCAAA CTGAAATTGC TCTAGGCTTA CAAGCTGCGC TGCGAGTAGG GCGCTTGATG GATGAGCACA ATGCGGCGCC TGAGATGATT TCTCTGATTA AGCGCAACAA CTGTGGTAAG GCGCTCAATA TTGCTCGTGT GGCACGTGAT ATGCACGGCG GTAATGGTAT CAGTGATGAA TTCCATGTGA TTCGCCATGT TATGAACTTA GAGGCCGTGA ATACTTATGA AGGCACTCAT GACGTACATG CCCTTATTCT AGGCCGTGCT CAGACGGGTA TTCAAGCTTT TGGTTAG
|
Protein sequence | MSSNAHATHR STFEWSDPFL LHDQLTEEEQ MVQRSAHDFC QSELMPGILQ ANRHENFDRN IMRQMGELGL LGVTIDGYGC AGLSSVAYGV IAKEVEAVDS GYRSAMSVQS SLVMHPIWAY GTEAQKEKYL PKLATGEYVG CFGLTEPDAG SDPGSMKTRA KKVDGGYQLK GSKMWITNSP IADVFVVWAK DDEGEIRGFV LEKGMKGLSA PKIEGKFSLR ASITGEIVMD DVFVPEENAF PDIRGLKGPF GCLNKARYGI AWGSMGAAEF CWKAARQYTL DRKQFNRPLA ATQLVQLKLA DMQTEIALGL QAALRVGRLM DEHNAAPEMI SLIKRNNCGK ALNIARVARD MHGGNGISDE FHVIRHVMNL EAVNTYEGTH DVHALILGRA QTGIQAFG
|
| |