| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1506 |
|---|
| Symbol | |
|---|
| ID | 5205676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1839823 |
|---|
| End bp | 1841946 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640599726 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001280399 |
|---|
| Protein GI | 148653306 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAA CGTTTTACGC GACTCACCCC CTAAAGCAAG CTATTTTATT AGCCTTAACG
GGTTTATGCG CTGGATATGC CATTAGTGCT CAAGCACAAA ATCATACAAT CAATGATACC
CAAGCAATTA ATGACAACAC GGACACTCAA AATGCTGCGC TGCAGCATAC AAAGTTTGAT
CCTATTGTTG TGACTGCCAC GCGAAGCAAT AAGTATTTAA GTGAGACGCC GATACCAGTA
CAGGTGCTGG ATAAAAATAA ATTAAAACAA AACCATGCCC AGACCTTAAA GCAAGCACTA
GAGCTGCTGC CCAATGTGTA TTTGGCTCAG CTGCGTGGCA AAACTGGCTA TGAGGTCAGA
ATGCAGGGCT TATCAGGCGA TCAAGTACTG GTACTTATCG ATGGTCTGCC AGTATCGGCC
AGCACCAGCT CAAGCTTCAA TATCGCTCAA TACCTCAATA CTCAAGTAGA GCAAATCGAG
GTCATTCAAG GGGCTGCTTC TGCACAATAT GGTAGCTCAG CGATGGGCGG TGTTATCAAT
ATCATTACTA AGCCCATCAG TGACACCCAT GCCTCTATTA CCGCAGAGCT TGGTACCAAT
ACCTCACAAA ACCCTTCAGA CAAAAAATTT GATAACAACT ATAGCTTTGT AGAGGGCAGT
GTCGAGGGTG CTTTATCAGA TGACAAGCGT CTAAAAGCGC GCTTATCGGG GGCTTATCGT
GATGATAAGG GTCTTAGCGT AGATAATGAG GCTTGGCCTC GTCTAAAAGA TGCCACCGAA
CAAAAACAGG TGCAGGCCAA AATCAGCTTT ACTCCTGATA TCAATGAAGT GGATACAGCC
AACCCCAATA GCCGATACTG GCTAGAGGCG GGATATTATG AAGAAGAGGA CAGCAGTCGC
TTCAATTATG TTGCCCGTAA TGGCGCGGTA CAGGCGCAGC AGCGAGATGA GGATATTAAG
CGAAAAAGAG TCAGTGCCGG CGGTGAGACT AAGATTTTTG CAGGCAATGC AGAGGGGTAC
AAGCTATCAG GCTCAGCACT GTATGAGAAC TATGACAGTC AGTCGCACAA TACGGCCAGT
GGCAAAGTCA GTGATGTGCG TGACTTTGAT TTAACGACCA ACTTAGCACA GCTACAGCTA
GATTTTCCGC TTATTTATAG TGGAGAGAAC CAATGGCATG CGCCGCAATT GGGTTTGAAG
TATCAAAAAG ATAAGCTCGA TCAAAAAATA GATGGCGTGT CAGAGTTTAT CACCGATAAA
GTCGATCGTG ATGTACTTGA GGCTTATGTT CAAGATGATT GGGCATTAAG TGACAATACT
GAGCTGGTGG CGGGCGTGCG CTATCAAGAT GACAGTGACT TTGGTAGTCA TTTTGCGCCA
AAACTTGCCT TAAAACACGA TTATTATGAT GCCAATAATC GCAAGCATGT GTTTCGTGCT
AGTGTCGGTC AAGGCTACCG AGTACCCAAT TTAAAAGAGC GATACTATCT ATTTGACCAC
AGCAGGTATG GCTATAAAGT CATGGGCAGC CCTGATTTGA AGCCTGAAGA GTCGATAAGT
TATCAGCTGG GCTATCAGAC TCAGCTAAAC GATAAAGTCG GCGTGAGTGT TAACGGCTTT
TATAACGATG TCAAAAACCT GATCCAAACC GATAATAACC ATCCGGTAAT GGACGGTGGC
ATAAAGGTAT TTAGCTATGA CAACGTCGAT AAGGCCGAGA CCTATGGCGG AGATATAGGG
GTTGATTGGC AGCTAAATGA TAAAGCGATG CTCAATTTGG GTTATGGCTA TTTGCACACC
AAAAACAAAA CCACAGGTGG CGACCTTACC TATAGTCCTG AGCATAAGGT AACCGCCAAT
GTACAGTATC AAGTGACCGA TAAACTGCAA TTTATACAAC AAGTACGGTA TGAGTCCAAA
CAGTTAACCG ATACCGCTGC CAGTAGCTAT TCACCTCACT GGTGGGGGCT TGATAGCCGT
TTTAACTATA CAGCCAGTCC GAATTTAGAT CTATATATGG CAATCAATAA CTTACTTGAT
GAGCAGCGCA GTGCCAGTGA TGCCAACGAT CAGCGGCCTA TTGATAACCG TCAGTGGTTA
GTGGGTGCCA GTTATCACTG GTAG
|
|---|
| Protein sequence | MTQTFYATHP LKQAILLALT GLCAGYAISA QAQNHTINDT QAINDNTDTQ NAALQHTKFD
PIVVTATRSN KYLSETPIPV QVLDKNKLKQ NHAQTLKQAL ELLPNVYLAQ LRGKTGYEVR
MQGLSGDQVL VLIDGLPVSA STSSSFNIAQ YLNTQVEQIE VIQGAASAQY GSSAMGGVIN
IITKPISDTH ASITAELGTN TSQNPSDKKF DNNYSFVEGS VEGALSDDKR LKARLSGAYR
DDKGLSVDNE AWPRLKDATE QKQVQAKISF TPDINEVDTA NPNSRYWLEA GYYEEEDSSR
FNYVARNGAV QAQQRDEDIK RKRVSAGGET KIFAGNAEGY KLSGSALYEN YDSQSHNTAS
GKVSDVRDFD LTTNLAQLQL DFPLIYSGEN QWHAPQLGLK YQKDKLDQKI DGVSEFITDK
VDRDVLEAYV QDDWALSDNT ELVAGVRYQD DSDFGSHFAP KLALKHDYYD ANNRKHVFRA
SVGQGYRVPN LKERYYLFDH SRYGYKVMGS PDLKPEESIS YQLGYQTQLN DKVGVSVNGF
YNDVKNLIQT DNNHPVMDGG IKVFSYDNVD KAETYGGDIG VDWQLNDKAM LNLGYGYLHT
KNKTTGGDLT YSPEHKVTAN VQYQVTDKLQ FIQQVRYESK QLTDTAASSY SPHWWGLDSR
FNYTASPNLD LYMAINNLLD EQRSASDAND QRPIDNRQWL VGASYHW
|
|---|
| |