| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1500 |
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| Symbol | |
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| ID | 5205267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1830832 |
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| End bp | 1833099 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599720 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001280393 |
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| Protein GI | 148653300 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000356406 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.318798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGT CTCGTCTATC CTCAGCATTA TTACACATTC ATCATACTTA CACCGCAGGC
TCTTTTAAGC CTTTGTACTG TCTATCAGCA TCTGTATTCT TGCTAGGCGG CAGTCCACTG
GCCCTAGCGC AAACTGATGA AGCTACTGAG ACGCCACCAA GCGCTATGTT TGACTCTATT
GTCGTCACTA CGAGCGCTGA CGCTTCGGCA CAAGGCTTAC CCGTCGCCTA TGAGGGTGGA
CAAGTGGCCA CCGGTAGCCG TGTTGGGCTA CTGGGCAACC AAGATATCAT GGACACCCCT
TTTTCGACCA CCGCTTATAC CAATGAGTAT ATAAAAAATC AACAAGCGCA CAGTGTGGGA
GACCTACTTA AAAAGGATCC GACTGTTCGT GTGGCAAGAG GCTTTGGTAA CTTCCAAGAA
GCTTATTTAA TGCGCGGCTT TGTGACCAAC TCTGATGACA CTATGTTCAA TGGCCTGTAT
GGTATTTTGC CGCGTCAATA CATAGCCACA GAATTATTCG AGCGTGTGGA ATTACAGCGC
GGTGCGTCTG CTATGCTTAA TGGTGCCGCG CCCAGTGGTG GTAATGCTGG TGGTAGTATC
AACTTACTGC CAAAGCGTGC CGGCAATGAG CCACTGCGCC AGTTAACCTT AGGCTATGGT
GCCGGTGACC AAGGCCGAGT GGGCATCGAT GTTAGCGACC GTTTTGGTCA AGATGACGCC
GTAGGGATTC GCTTCAACGC CGCCTATCAA GACGGTGACA GTGCTGTTGA CAATGAATCT
GCCAAATTGG GCGTGGCAGC TCTTGGTCTC GATTACCGCG CAGACAAATA CCGTGTTTCA
GCGGACTTCG GCTGGCAAGA CAATAAGCTT GATGAGACAC GACCTAATGT GACCTTAAGT
GGCGTCACTG CTGTTCCTAA AGCACCAAAA GGCGACAAAA ACTGGGCCCA GCCTTGGAGC
TACTCTAACG AAAAAGACCT ATTTGGTACT GTCCGCGCTG AATACGACTT CCAAGACAAC
TTAACTGGTT ATGCCGCTTA TGGCGCCCGA AAAGGTGAAG AAGAGAACTC TTTGGCCAAC
CTTACGGTCA CCAATACCGA CGGCACTGGT AGCACTTATC GCTTTGATAA CACCCGTGAA
GATAAGGTGC AAAGCGCGCA GCTGGGCTTA CGTGGCAAAC TACAACTTGG TAACACTCAG
CACAACTGGA CTTTAGCTGG CGACTTATAC GATCAAGAAG AAAAAGGGGC TTATGCCTTT
GATTATGGCA ATCAACTGCC CACCAACTTG TATCGTCCGA CCGCTCATAA AGACAATAGT
TGGACTGGCA CTACTGCTTA TGGCGGTAAC TTAAGTGACC CAAGGCTTGC TTCTGAGACT
CAGTTAACCA GCGTGGCGCT AGCAGACACC ATTAGCTTGA TGGATGATAA ATTAAAAGCT
ACCTTGGGCG TGCGCCATCA AAACATCGAA ACCCGCAGCT ATGACTATAG CACTCAAGTC
AAAACTTCAG ATTATGATGA CAGTGAATGG ACCCCAAGCG TTGGCCTAGT CTATCAGCCC
AATAAAGACT GGTCGGTGTA TGGCAACTAT ATCGAAAGCT TAAGTAAAGG TGAGACTGCG
CCTGCTGAAT CAGCAAATAA ACCAGTGACA AATGCTGGTG AAGCCTTATC ACCTTATGTG
TCCAAGCAAT CTGAGATTGG TTTAAAGTAT GACAACGGTA CCGTGGGCAG TAGCCTTGCG
ATCTATCACA CGACGCAGCC GCGTGCTTAC GTGAATGATG CCAATACCTT TGTAGAAGCG
GGTGAAAACC GCCATCAAGG TGTTGAGCTT ACTGTGTTTG GTAGCCCAGC TGAGAACTTG
CGCTTTAACG CGGGGGTGAG CTACTTAGAT GCCAAACAAA CTGATACCGG CTCACAAGTA
TTCGATGGTA AACGCGTGAT TGGTATTCCT AAGCTTCAAA GTAACTTCAA TTTAGAATAT
GATGTTGCCT CTGTCTCTGG CTTAACTTTA ACTGGTGATG TGATTCATAC CGGCAGCCGT
TATGCCGATG CGGCCAACAC CCTAAAAGTT GATAGCTACA CCACCTTAGA CTTAGGTGCC
CGCTACCGCA CTAAGTTAGG CAAGCAAGAT ATGACCTTAA AAGGTGTGGT GAGCAATGTG
ACGGGTGAAG ATTACTGGTC GGTAGGAAAA TATGCAGGTA GTGAAATGGG TTATCTTAGC
GCTAACGAAC CTACCGCAGT TAAAGTATCA GCGACTTTTG ATTTCTAG
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| Protein sequence | MQLSRLSSAL LHIHHTYTAG SFKPLYCLSA SVFLLGGSPL ALAQTDEATE TPPSAMFDSI
VVTTSADASA QGLPVAYEGG QVATGSRVGL LGNQDIMDTP FSTTAYTNEY IKNQQAHSVG
DLLKKDPTVR VARGFGNFQE AYLMRGFVTN SDDTMFNGLY GILPRQYIAT ELFERVELQR
GASAMLNGAA PSGGNAGGSI NLLPKRAGNE PLRQLTLGYG AGDQGRVGID VSDRFGQDDA
VGIRFNAAYQ DGDSAVDNES AKLGVAALGL DYRADKYRVS ADFGWQDNKL DETRPNVTLS
GVTAVPKAPK GDKNWAQPWS YSNEKDLFGT VRAEYDFQDN LTGYAAYGAR KGEEENSLAN
LTVTNTDGTG STYRFDNTRE DKVQSAQLGL RGKLQLGNTQ HNWTLAGDLY DQEEKGAYAF
DYGNQLPTNL YRPTAHKDNS WTGTTAYGGN LSDPRLASET QLTSVALADT ISLMDDKLKA
TLGVRHQNIE TRSYDYSTQV KTSDYDDSEW TPSVGLVYQP NKDWSVYGNY IESLSKGETA
PAESANKPVT NAGEALSPYV SKQSEIGLKY DNGTVGSSLA IYHTTQPRAY VNDANTFVEA
GENRHQGVEL TVFGSPAENL RFNAGVSYLD AKQTDTGSQV FDGKRVIGIP KLQSNFNLEY
DVASVSGLTL TGDVIHTGSR YADAANTLKV DSYTTLDLGA RYRTKLGKQD MTLKGVVSNV
TGEDYWSVGK YAGSEMGYLS ANEPTAVKVS ATFDF
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