Gene PsycPRwf_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1499 
Symbol 
ID5205266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1829561 
End bp1830691 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content46% 
IMG OID640599719 
Productsugar efflux transporter 
Protein accessionYP_001280392 
Protein GI148653299 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000671324 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.520287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCA GTGCTTTTGT TATGAATACC ACTGAATTCG TGCCTGTGGC TTTATTAAGC 
GATATTGCCA AAGACTTCTC CATCACCACC GCCGAAACCG GCTGGATGCT CACCTTATAT
GCCTGGATTG TGGCGGCCAT GTCGCTGCCA TTAATGCTAC TCACCAGTAA GCTTGAACGC
AAAAAGCTAT TACTGGGTAT TTTTGCATTA TTTATCGTCA GTCATGCGCT ATCCGTATTT
GCTTGGAGTT TTAATGTTCT ATTAATTAGC CGAGTGGGTA TCGCTTTTTC TCATGCTATA
TTCTGGTCAA TCACCGCAGC GATTGCCATT CGAGTGGCGC CTGAAGGCAA AAAAGCCTTC
GCCTTAAGCG TGGTGGCAAC CGGCACTTCC TTGGCTATGG TACTGGGTGT TCCTTTGGGC
CGAGTGATCG GACAGTGGTA TGGCTGGCGT ACTACTTTTG GCGGCATAGG TATTGTGGCA
CTGGTGGTTT GCTTATTACA AGCTAAGCTA CTACCGTCAT TGCCTAGCAT GTTTAAAGGC
TCTTTTAGAA AAGTGCCAGA ACTGCTAAAA AACCCACTTT TGGTCTGTCT GTACTTGCTT
ATCTTTACCG TATTTACCGC CCACTATACC GCCTATTCAT ATATCGAACC TTTTATGCGT
GAGATTGGCT CAATTAGTGA GAACTTGGCA ACCTTTGTAT TATTATTATT CGGGGGCGCA
GGCATCATCG GTAGTATCTT ATTTAGCCGC TGGGGAGACA GACACAGCAC CTTATTGATG
CTGGGCTCTA TCATAGTCAT GCTAGTGTCT ATGCTTACCT TGTTATTGGC GGTCAACTCT
ATCTGGGCGC TTAGCCTTAA TGCCTTGTTA TGGGGCACGG CATTAATGCT GTTAATCATC
TCTATGCAGG CCAAAGTACT TATGGTGGAT CTGCATGCCC AAGACATGCT GATGTCTATG
TTCTCAGGCA TTATTAACTT AGGTATTGGT ACAGGCGCCT TATTTGGCGG TTATGCAGTG
ACCCACATCT CGTTATCCAG TGTGGGCTAT GTTGGCGCGG TGATTAGTCT AATCGCCTTA
TTGCTGGTAG CATTTATGAT TAAGCGCTTC CCCGCTTTAC GGGCATCTTA G
 
Protein sequence
MGISAFVMNT TEFVPVALLS DIAKDFSITT AETGWMLTLY AWIVAAMSLP LMLLTSKLER 
KKLLLGIFAL FIVSHALSVF AWSFNVLLIS RVGIAFSHAI FWSITAAIAI RVAPEGKKAF
ALSVVATGTS LAMVLGVPLG RVIGQWYGWR TTFGGIGIVA LVVCLLQAKL LPSLPSMFKG
SFRKVPELLK NPLLVCLYLL IFTVFTAHYT AYSYIEPFMR EIGSISENLA TFVLLLFGGA
GIIGSILFSR WGDRHSTLLM LGSIIVMLVS MLTLLLAVNS IWALSLNALL WGTALMLLII
SMQAKVLMVD LHAQDMLMSM FSGIINLGIG TGALFGGYAV THISLSSVGY VGAVISLIAL
LLVAFMIKRF PALRAS