| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1498 |
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| Symbol | |
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| ID | 5205265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1827959 |
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| End bp | 1829296 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599718 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001280391 |
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| Protein GI | 148653298 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00333437 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.389664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAATG GACAAAAAAT CGGGTTGGCC ATGCTCACTG CCATTGTGTT CAGCTCAATG
GTGGGTGCCG GTATCTTTAG CTTACCGCAG AATATGGCCG AGGTTGTAGG CGCAAATGCC
ATTATTACCG CTTGGCTTAT CACCGGTGTG GGTATCTTAT TTCTCGCCGG CTGTTTTTTG
CACTTATCAC GTCTTAAGCC CGAGCTTGAT GGCGGTATTT ATACTTATGC CAAAACCGGC
TTTGGCGATT TGGCAGGTTT CTTTTCGGCC TGGGGATACT GGCTGTGTGC CACCATTGGC
GTGGTGGGCT ATTTGGTAGT CGCATTTGCC GCTTTGGGTA GTTTTGTTGA TACCCCCAAT
CAGGTTATCT TTGGGGAGGG CAATACCTTA TGGGCCTTAT TGGGTGAGTC TTTTATCTTG
TGGCTGGTAC ACTACCTGGT GCTGCGCGGT GTCAAACAAG CGGCCTTTAT TAACTTGCTA
GCAACTTTGG CAAAAAGCCT ACCGCTTATC GCTTTTATTA TATTTGCGTA CTATGCATTT
GATATTGACA CCTTTAATAC TGATCGTGCT GGCACCAGTT TAGAGGTGCC TTTTATGGAT
CAGGTCAAAA GCACCATGCT GATCACTTTA TGGGTGTTTA CCGGTATTGA AGGGGCCACT
GTGCTATCAC AGCGGGCCAA AAGGCGCGCT GATATCGGGC GGGCTACTTA TATTGGTGTG
ATCTTAGCAT TGGTGATATA TATTGCCATT ACCCTACTTT CGCTAGGGGT TATGAGCCGG
GCCGATGTTG CGGCTCTAAG TAACCCGTCA ATGGCGGGTA TCATGGCGCA TATGACAGGC
AGTTTGGGCA AATGGGCCAT TAGTATTGGC CTTGTTATCT CCGTATTAGC CTCTTATTTG
AGCTGGATTT TGTATTCGGC TGAAGTGCCC TATACCGCAG CTAAATACCA GGCTTTCCCG
CGTATTTTCA CCAAACAAAA TGCGCAAGGC ACACCCACTG CCTCATTGAT GCTCACCAGC
TTCACTGTGC AGCTGTGTCT ATTAATGATA TTTTTGACAG GCGAAGGCTA CAACCTATTG
GTGCGCATCT CAACCTCTAT GATTCTGATA CCCTACTTTT TGGTCGGAGC CTATTTGGTT
AAGCTATCTT TTGCCCAATC AGAGCGGTGG CATATCAAGG CGGTGGGGCT AGGCGCCATT
ATATATGGTG TTTGGCTAAT TTATGCCGCG GGCATTGATA ACCTATTGCT GTCACTATTA
TTGTATGCAC CTGGCCTGAT GATTCTTTAT TATAGCCGCT ATCAGGCACA CCAGCAGACA
CTACAGCCCC CATCTTAG
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| Protein sequence | MLNGQKIGLA MLTAIVFSSM VGAGIFSLPQ NMAEVVGANA IITAWLITGV GILFLAGCFL
HLSRLKPELD GGIYTYAKTG FGDLAGFFSA WGYWLCATIG VVGYLVVAFA ALGSFVDTPN
QVIFGEGNTL WALLGESFIL WLVHYLVLRG VKQAAFINLL ATLAKSLPLI AFIIFAYYAF
DIDTFNTDRA GTSLEVPFMD QVKSTMLITL WVFTGIEGAT VLSQRAKRRA DIGRATYIGV
ILALVIYIAI TLLSLGVMSR ADVAALSNPS MAGIMAHMTG SLGKWAISIG LVISVLASYL
SWILYSAEVP YTAAKYQAFP RIFTKQNAQG TPTASLMLTS FTVQLCLLMI FLTGEGYNLL
VRISTSMILI PYFLVGAYLV KLSFAQSERW HIKAVGLGAI IYGVWLIYAA GIDNLLLSLL
LYAPGLMILY YSRYQAHQQT LQPPS
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