Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1468 |
Symbol | |
ID | 5205675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1800001 |
End bp | 1801476 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599687 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001280362 |
Protein GI | 148653269 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.986472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.151461 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACCG CTGCAAATGC ACAAAACCAA AAAATGATAA AACCCATCCC AATATTGATT TCCTTTTTGA TTGCTGGATT TATTGGCCTC TTTAGTGAAA CCGCATTAAA TATGGCACTT GGCAATTTGA TGCAGGAGTT CAACGTAGTC TCCTCAACTG TTCAGTGGAT TACCACAGGC TACTTGCTGA CCATGGGCAT CCTTATTCCG GTTACCGCCC TACTCATACA ATGGTTAACA ACACGGCAAT TATTCATCTC ATCCGTATTG TTCTCAATCG CTGGTGTCGT TCTGTCAGGA TTGGCGTCAA CATTCAATGT GTTATTGCTG GGCCGTGTGA TTCAAGCCAT CGGCACAGGC TTATTGATTC CTTTAATGTT CCATACCGTG CTCATCATTT TCCCCGTTCA TAAACGAGGG GTTATCATGG GCGTGGTGGG TTTGGTGATG ATGTCAGCGC CCGCTGTCGG GCCTGCAACC TCAGGGCTCA TCATTGAAGC ATTGAGCTGG AACTGGATTT TGTGGTTAAT CCTGCCATTT CTTCTATTTA CCTTGGTTTA TGGGTTTATT TTCGTCCAGA ACGTTTCGAC CCTAACCAAA CCAAAAGTTG ATGTGCTTTC TATCTTTTTA TCGACCATTG GTTTTGGCGG AATTGTCTAT GGATTTAGTG TTGCAGGCCA CCAAGGTTGG GGCAGCCCGA TTGTCATAAG CTCTCTAGCT ATCGGTTTGG CATCATTGAT TGTCTTTTCA ATCAGACAGT TCAAAATCGA CAACCCAATG CTTGATTTAC GCACTCTAAA ATACCCCATG TTCACTTTAG GTTTATTGAG CGTTTCGGCA ACCTTCATGA TTATTTTATC AACCATGATT TTGCTGCCTT TATATCTACA GATTGGTCTG GGTCTGACTG CACTAACAGC AGGTCTTATC TTAATGCCAG GTGGCGCCCT AAACGGTATT TTATCGCCTG TTGCCGGTCG TGTTTATGAT AAGTATGGGC CTAAATACCT ACTGACACCC GGTTTTATCA TCATGCTATT CATGCTTTGG AACCTATCAA ACATGACTAT TGATACTTCA AAAGAAATGG TGATTTTATT GCACTCAGGC TTGATGATTG GCGTGACCTT CGTCATGATG CCACTGCAAA CCCATGGCCT AAATGCCCTA CCTGCCAAGC TGTACCCAGA TGGCACTGCA CTGATTAACA CCTTGCTGCA AGTATCAGGC TCTATTGGCA CAGCATTGGC AATCACCATC ATGTCGGCGG CTCAAAACAC CTACTTGCAG GATTTTCCAA ACCCATCGGA TCCCGCGCTC GTCGGAGCTT CACTAACCGC AGGGGTGCAA ACGGCCTTTA TTTTAGGCAT TGTGCTGGCA ATTAGTGGGT TGATTATGTC GCTGTTTATG AACAAGCCGA CACAGCAAGA ACTGATGTAT GCTGAAAAAA CCGTAGACAG AAACTTGGTA AACTAA
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Protein sequence | MSTAANAQNQ KMIKPIPILI SFLIAGFIGL FSETALNMAL GNLMQEFNVV SSTVQWITTG YLLTMGILIP VTALLIQWLT TRQLFISSVL FSIAGVVLSG LASTFNVLLL GRVIQAIGTG LLIPLMFHTV LIIFPVHKRG VIMGVVGLVM MSAPAVGPAT SGLIIEALSW NWILWLILPF LLFTLVYGFI FVQNVSTLTK PKVDVLSIFL STIGFGGIVY GFSVAGHQGW GSPIVISSLA IGLASLIVFS IRQFKIDNPM LDLRTLKYPM FTLGLLSVSA TFMIILSTMI LLPLYLQIGL GLTALTAGLI LMPGGALNGI LSPVAGRVYD KYGPKYLLTP GFIIMLFMLW NLSNMTIDTS KEMVILLHSG LMIGVTFVMM PLQTHGLNAL PAKLYPDGTA LINTLLQVSG SIGTALAITI MSAAQNTYLQ DFPNPSDPAL VGASLTAGVQ TAFILGIVLA ISGLIMSLFM NKPTQQELMY AEKTVDRNLV N
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