| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1463 |
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| Symbol | |
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| ID | 5205671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1794867 |
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| End bp | 1795997 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640599681 |
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| Product | porin |
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| Protein accession | YP_001280358 |
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| Protein GI | 148653265 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000881778 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0418658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TCGTTGCTCC TCTTGCCTTG TTTTATTTTT GTTGCCCTGC CGCTTATGCA
GAAGCGCCCA AGCTATTCGG CAACTTGTTT GTACAAGGCT ATTATTCTGA CGCAAACTTT
GATGCAGATA AAAAGCAGTT AGCAGATAAG TATCCTACCT ACCAAGGCAG TGGTAAATAC
GGAGAAGATG ACTTTCATAT CAAAACTTAT AAATCAACAA TAGGTCTTCG AGGTTCAGAG
CCTATTAGTG CGACCACAGA CGTGGTTTAC CAGTTTCAAT TTGGTGTGAA TTTGACCGAA
AGTAATGGCT CAAGTGTTGA TTTGCCCAAT CGTAGTAACT ATTTAGGCTT AAAAAATGAT
ACATGGGGCA CAATAAGAGC CGGTCGCTAC TGGACCCCTG TGGATTTGAT TAACAATGTC
GTTGTTGCTA AAGGCATCTG GGACAATAAC GGCACGACTC AATTGTCAAA AACCACACAA
TCTGTTAACG CACTAAACAT GACCGATGCC GTACCTCGGG TATCTAATGT CCTCTTCTGG
CAGTCACCAG AGCGTAAGGA TTTGCCATTT GAGCTGTTTG TGATGTATCA GGCGGATGAG
GATAATGAAT ACCACAATGG CGAAGGCTTT GGCAGCTATC TCACCTATAA GCCTAATAAT
GGCTTGGTGG CAAGCGTTGC TTATGACAAG GACCTAGAAA TCTCAGGGTC TCTTGTGCGC
GGTACCGCCA CCTATGATTT AGCCAAATCC ACTAACGTGC CTGTTACGTT AGGCGCCTTA
TACCAAGTGG CTGATTATGA CGGCTACTCA GAAAAAGAAA AAGGCATGGT ACTTAGTGCA
AAGCTCGGCT TAAGCAACTT CGCAAGACCT GCCTCAGTAT ATGCTCAGTA CAATAGAAGT
ACTGATTTAC ATGGTATCTC TGGCGCAGAC TCTAATCAGA TTGCGATCGG TGGTGAATAT
AACTTTAAAG ATAACGTCAT TGCCCATGCT TATATGGGTT ATAACAAGGC AAAAGATGTG
GAAGGATATC TTGGCACACA AGAGGATGCC AATGGTGAAT TAACCCCTCT GTATGCCAAA
GGTGACTCAG ATTATTTTGC TATTGGCACA GGTCTTCAAT ACAAGTTCTA G
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| Protein sequence | MKKIVAPLAL FYFCCPAAYA EAPKLFGNLF VQGYYSDANF DADKKQLADK YPTYQGSGKY
GEDDFHIKTY KSTIGLRGSE PISATTDVVY QFQFGVNLTE SNGSSVDLPN RSNYLGLKND
TWGTIRAGRY WTPVDLINNV VVAKGIWDNN GTTQLSKTTQ SVNALNMTDA VPRVSNVLFW
QSPERKDLPF ELFVMYQADE DNEYHNGEGF GSYLTYKPNN GLVASVAYDK DLEISGSLVR
GTATYDLAKS TNVPVTLGAL YQVADYDGYS EKEKGMVLSA KLGLSNFARP ASVYAQYNRS
TDLHGISGAD SNQIAIGGEY NFKDNVIAHA YMGYNKAKDV EGYLGTQEDA NGELTPLYAK
GDSDYFAIGT GLQYKF
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