| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1445 |
|---|
| Symbol | |
|---|
| ID | 5206474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1769036 |
|---|
| End bp | 1769815 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640599663 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001280340 |
|---|
| Protein GI | 148653247 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.318112 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTCA ACCAAAAAAT ATTACTAGTG GGCAAGCAAG CATTGACTCT TATCAAAAGC
CACGTGTTAG TGATTTTGAT ATTGTTGGTG TGGCAACTGT GCGTACAGTT TGAGATTATT
CCAGATTATC TGCTGCCCTC ACCCTTACAA ATTGTTCAAG CCTTTATTGA GGACTTTGGG
TTATTGATGG AACATGCTAA ATATACGTTG GCCACAGCCA TTATTGGTAC CACCATTGGT
CTGATCGTAA GTTTTGTACT CTCTATCTGC ATGGATTTAT CAAAAACCAT CAGGGATTTG
GTCTATCCGG TGATTTTGCT CAATCAGACC ATTCCCACTA TTGCCATTGC GCCTTTGCTT
ATTATTTGGC TTGGCTACGG CATTACCCCT AAAGTGGTGT TGGTCATTTT AGCGGTATTT
TTTCCCATAA CCATTGCTTT AATTGACGGC TATCAATCGG TGAGCCGTGA GCACTTAAAT
TTGTTTAAAT CGATGAAAGC GTCAACGTAT CAGCTATATC GTCATTTAAA AATCCCTTCT
GCCATGGGCT CTTTTTTTAC CGGCCTAAAA GTGGCGTTAT CTTATGCCCT CATCTCAGCG
GTGATTGCAG AATGGCTGGG TGGCTATCAT GGGCTGGGTG TTTATATGAC CCGAGTGCGT
AAGTCGTATG ATTTAGATAG CATGTTTGCG GTTATTTTTT TGATTAGTTT TCTAACCATT
TTATTGATTG CGCTGGTTAA ATGGTTAGAA AGACGGGTTC TAAGACACAA TTTTTTATAA
|
|---|
| Protein sequence | MTLNQKILLV GKQALTLIKS HVLVILILLV WQLCVQFEII PDYLLPSPLQ IVQAFIEDFG
LLMEHAKYTL ATAIIGTTIG LIVSFVLSIC MDLSKTIRDL VYPVILLNQT IPTIAIAPLL
IIWLGYGITP KVVLVILAVF FPITIALIDG YQSVSREHLN LFKSMKASTY QLYRHLKIPS
AMGSFFTGLK VALSYALISA VIAEWLGGYH GLGVYMTRVR KSYDLDSMFA VIFLISFLTI
LLIALVKWLE RRVLRHNFL
|
|---|
| |