Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1407 |
Symbol | |
ID | 5206334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1729553 |
End bp | 1730218 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640599625 |
Product | alpha/beta fold family hydrolase-like protein |
Protein accession | YP_001280302 |
Protein GI | 148653209 |
COG category | [R] General function prediction only |
COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.192028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACAA AATCACAAAA ATTATTGATT GATGGCCCAG TTGGTGTGCT TGAAGTGGAA GCACTGTGGC AACATGAGAA CCCAGAAGAT GCTAACACCA AGGGTGTGGC GTTATTATGT CATCCCAACC CTTTATTCGG TGGTACCATG ACCAATAAAG TGGTGACCAC TATGTTCAAC TTTGCTCGCG ATGCTGGTAT GCATGTGGTC CGTTTTAACT TTCGCGGCGC CGGTAAGTCC ACTGGTGAGC ACGATTATGC CAAAGGTGAG ATTGAAGATG CCATGGCAGT ACTACAGTGG ATTAGCCTAC AAACCCCTGC GCGCAAGCTA TGGCTTGGTG GTTTTTCTTT TGGGGGCTAT ATTACCGCCC GCGTCGCTGA GCAGCTGATG GTCACCCCGC ATATTTGGGG CCTAAGCGAT ATGGAGCTGG TGAAAGTGGT ATTAATGGCG CCCTCTGTAG AGAATAACGA CGCCTCTGAT GTGCTGTTGC CGACTCAAAA GACCCTCGAG ATTTACGGAG ATGCTGATAA CGTCATCAAG CCACATCTGA TGCAGCAGTT CGCCGATGAT AAGCAAATTG CCAGCTATGT GGTAGAAGGG GCAGGTCACT TCTTCCATGG TCGACTGACT GAAATTAGAT CTTTACTAGA GCAGCACGCG CTATAA
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Protein sequence | MKTKSQKLLI DGPVGVLEVE ALWQHENPED ANTKGVALLC HPNPLFGGTM TNKVVTTMFN FARDAGMHVV RFNFRGAGKS TGEHDYAKGE IEDAMAVLQW ISLQTPARKL WLGGFSFGGY ITARVAEQLM VTPHIWGLSD MELVKVVLMA PSVENNDASD VLLPTQKTLE IYGDADNVIK PHLMQQFADD KQIASYVVEG AGHFFHGRLT EIRSLLEQHA L
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