Gene PsycPRwf_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1407 
Symbol 
ID5206334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1729553 
End bp1730218 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content49% 
IMG OID640599625 
Productalpha/beta fold family hydrolase-like protein 
Protein accessionYP_001280302 
Protein GI148653209 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.192028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAA AATCACAAAA ATTATTGATT GATGGCCCAG TTGGTGTGCT TGAAGTGGAA 
GCACTGTGGC AACATGAGAA CCCAGAAGAT GCTAACACCA AGGGTGTGGC GTTATTATGT
CATCCCAACC CTTTATTCGG TGGTACCATG ACCAATAAAG TGGTGACCAC TATGTTCAAC
TTTGCTCGCG ATGCTGGTAT GCATGTGGTC CGTTTTAACT TTCGCGGCGC CGGTAAGTCC
ACTGGTGAGC ACGATTATGC CAAAGGTGAG ATTGAAGATG CCATGGCAGT ACTACAGTGG
ATTAGCCTAC AAACCCCTGC GCGCAAGCTA TGGCTTGGTG GTTTTTCTTT TGGGGGCTAT
ATTACCGCCC GCGTCGCTGA GCAGCTGATG GTCACCCCGC ATATTTGGGG CCTAAGCGAT
ATGGAGCTGG TGAAAGTGGT ATTAATGGCG CCCTCTGTAG AGAATAACGA CGCCTCTGAT
GTGCTGTTGC CGACTCAAAA GACCCTCGAG ATTTACGGAG ATGCTGATAA CGTCATCAAG
CCACATCTGA TGCAGCAGTT CGCCGATGAT AAGCAAATTG CCAGCTATGT GGTAGAAGGG
GCAGGTCACT TCTTCCATGG TCGACTGACT GAAATTAGAT CTTTACTAGA GCAGCACGCG
CTATAA
 
Protein sequence
MKTKSQKLLI DGPVGVLEVE ALWQHENPED ANTKGVALLC HPNPLFGGTM TNKVVTTMFN 
FARDAGMHVV RFNFRGAGKS TGEHDYAKGE IEDAMAVLQW ISLQTPARKL WLGGFSFGGY
ITARVAEQLM VTPHIWGLSD MELVKVVLMA PSVENNDASD VLLPTQKTLE IYGDADNVIK
PHLMQQFADD KQIASYVVEG AGHFFHGRLT EIRSLLEQHA L