| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1386 |
|---|
| Symbol | |
|---|
| ID | 5206631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1700016 |
|---|
| End bp | 1701377 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640599604 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001280281 |
|---|
| Protein GI | 148653188 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000523067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000000545429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACT TGCAAAACCA ACTGACCCAA ATCATGACCC AGCTACAGCT TGAAGATGCC
CCTGTTGGCG GCGCTGTGGT GGTCTATCAT AAAGGGCAGC TTGTGGCCCA GGCTTCTGTG
GGACAAGCGA CCCCGCGTTT AAGCTGGAAT AAAGACAGAT TGGGGCTGAA TTTTTCGACT
GGGAAAGGCG TATTGGTAAC TTTAGTCCAT ATCTTAGTCT CTAATAAGAT TTTGGCTTAT
GATCAGCCCA TTAGCCAGTA CTGGCCTGAA TTTGCCGCCA ATGGCAAGCA ACAAATTACC
TTGAGACAAG TGCTGACTCA CCGCTCAGGA CTGTTTAATA TTCAAGCCAT CACTGACTTT
GCCCCAGAGC TGACAGATTG GCAACTGATG CTGCAGCGTG TTGAGCAGAT GCCGCCCCAA
GCCACCTTTA ATGAGCAGGC CGAAAGTGCC TATAGTGCTT TAGTCTCGGG ATGGGTGATA
GGGGGCTTAA TCGAGAAAGC CACTAACTTG TCTCTAAATG AAGCCTTACA GCAGTATTTG
ACTGAGCCCT TAGGTATCAG TGACAGTATG TATTTTGGGG TGCCGGCCGA TAAGATTGGT
GAGGTGGGCA CGGTGGCTAG CAACTTTGAC GACTTTGATA CGGTGATGGG CTTAGTAGAA
GCTGATGCTA TCAATGAAGA TGAGGCTGAC AAAGCTGTCA AAAAAAGAAG TGCTAAACCC
AAGCTGCGCT CTGATTCAGA GGCTACCTTG GCCGCTTATC AAAGCTTGCC AAGCTACAGC
TGCTGGCAGC AGCTACTGGG TCAAAAGCAG TCTGATGCAC CGCTTAAAAC CTTGCAGATT
GCCAATTTAT ACTTTGATAT GAGTGGCGTT AAGATGCAAG ACTTCAAGTA TGCGTTGGTG
CCTGCCGGCC GCTCTGAATT TAATTATCAT ACCCCTGAAT CTTTGATGGC AAAAATACCG
GCGGCCAATA ATGTGGCTTC AGCCGACGCC TTGGCTAAGA TGTACGCCAT GCTTGCCAAT
AAAGGGATTT GGCAAGGCAA ACGGTTGATT GATGAGTCGG TGTTTGATGA GTTATCGAGT
GTTCATGTGG CAGGCAGTGA TGCGATTATG CCGGCCACTC ATCCTCAAAG CATGCATTGG
CGCCTAGGGT ATCACCGTAT ATTTAGCCGC TGTCAGCCTG CTGAGAATCT GCAGTATGCT
TTCGGTCATA TGGGTTACAA CGGCTCTATG GCTTGGTGTG ATACCCAAAA ACAGCTGGCG
GTGGCCTATG TGCACAATTA TGACGTTACT ATGACCACTG ACATTCGTCA GTTCGCTTTA
ATTGAGGCTA TTTTGGCGCA CTTTAGCAAG TCAATTGATT AA
|
|---|
| Protein sequence | MDNLQNQLTQ IMTQLQLEDA PVGGAVVVYH KGQLVAQASV GQATPRLSWN KDRLGLNFST
GKGVLVTLVH ILVSNKILAY DQPISQYWPE FAANGKQQIT LRQVLTHRSG LFNIQAITDF
APELTDWQLM LQRVEQMPPQ ATFNEQAESA YSALVSGWVI GGLIEKATNL SLNEALQQYL
TEPLGISDSM YFGVPADKIG EVGTVASNFD DFDTVMGLVE ADAINEDEAD KAVKKRSAKP
KLRSDSEATL AAYQSLPSYS CWQQLLGQKQ SDAPLKTLQI ANLYFDMSGV KMQDFKYALV
PAGRSEFNYH TPESLMAKIP AANNVASADA LAKMYAMLAN KGIWQGKRLI DESVFDELSS
VHVAGSDAIM PATHPQSMHW RLGYHRIFSR CQPAENLQYA FGHMGYNGSM AWCDTQKQLA
VAYVHNYDVT MTTDIRQFAL IEAILAHFSK SID
|
|---|
| |