| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1379 |
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| Symbol | |
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| ID | 5204722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1692635 |
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| End bp | 1693513 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599597 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001280274 |
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| Protein GI | 148653181 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0182353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000251864 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAT CTGCCTTACG TAAAGCTGTA AAAAACAAAA ACATCGTAAT CACTGGAGGC
TCTAGTGGTA TTGGCGAGAG CACCGCTTAC TTGCTAGCAG AGGCGGGCGC GCATGTGATT
TTAATTGCCC GATCTGTCGA TAAGCTTGAG GCAGTACAGG CCAAAATTAC AGCCTTTGCC
GGTAAGGCCA GTATCTATAG CTGTGACTTA ACGGACATGG ACGCCATTGT AGAGACAGCC
CAACAGATTT TAAAAGAGCA TAAGCATGTA GATATCTTAG TCAATAATGC AGGCCGCTCA
ATCCGCCGCT CTGTTAATGA GTCACTCGAT CGCTTTCATG ACTTTGAGCG CACCATGAGC
ATCAACTATT TTGGTGCCGT TAAATTGGTG TTAGAGTTTA TCCCAGGTAT GATGAAGCGC
AAAAAGGGTC AGATTATTAA TATCTCATCG ATTGGGGTAC TGGCCAATAC GCCTCGTTTT
TCGGCCTATG TGGCATCAAA AGCTGCCCTT GATGCGTTCA GCCGCTGTGT GGCTGCTGAA
GTAAAAGGCA AAAAAATCCA TCTGACTTCT ATTTATATGC CTCTGGTGCG TACGCCTATG
ATTGCACCGA CCAAGATGTA CAACTACATG CCCGCGCTAA GCCCGCAAGA AGCGGCAAAC
TTGGTGGCCA AGGCCATTAT CGAAAAGCCG GTCAGCATCT CAAGTAACAT GGGCCGTTTT
GCCTCAGCCA CCTATTCTTT AGTGCCCAAA TTTAACTTAG GTATTCAGTC TTTAGGCTAT
CGCATTTTCC CAGACTTTAA GGCCGCTAAG CAGAAAAATG CGAAGCCCAA TGTGCTTCAA
AGAGCCTTTG CTCGGATTTT GCCTGGTGAG CCACATTAA
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| Protein sequence | MKKSALRKAV KNKNIVITGG SSGIGESTAY LLAEAGAHVI LIARSVDKLE AVQAKITAFA
GKASIYSCDL TDMDAIVETA QQILKEHKHV DILVNNAGRS IRRSVNESLD RFHDFERTMS
INYFGAVKLV LEFIPGMMKR KKGQIINISS IGVLANTPRF SAYVASKAAL DAFSRCVAAE
VKGKKIHLTS IYMPLVRTPM IAPTKMYNYM PALSPQEAAN LVAKAIIEKP VSISSNMGRF
ASATYSLVPK FNLGIQSLGY RIFPDFKAAK QKNAKPNVLQ RAFARILPGE PH
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