Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1368 |
Symbol | |
ID | 5205557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1677964 |
End bp | 1678491 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640599586 |
Product | redoxin domain-containing protein |
Protein accession | YP_001280263 |
Protein GI | 148653170 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0376833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTACCC ATGTACCTGA TGTAACCTTC AAAACTCGTG TCCGTGACGA ATCTATCGGT GGAGAAAATC CATTTAAATG GTATGACTTA ACCACAGATG AGTTATTTGC CAATAAAAAA GTAGTTGTGT TCTCCTTGCC GGGTGCTTTT ACACCAACCT GTTCGACCAG TCACTTACCG CGCTACGAAG AGCTTTACAA TGAGTTCAAA GCGTTAGGTG TAGATGAGGT TGTTTGTGTA TCAGTAAACG ATGCGTTTGT TATGTACCAG TGGGGCTTGA AGCAAGGCCG TGAAAATGTT TTCTTGCTGC CTGATGGTAA CGGTGAGTTC ACTCGTAAAA TGGGTATGTT GGTTGATAAG AGCAACCTAG GCTTTGGTAT GCGTTCATGG CGTTATTCGA TGTATGTCGA TAATAAAGAA ATCAAACAAG TATTTATGGA GCCAGGTTTC GATGACAACT GCCCAACTGA TCCATTTGAA GTATCAGATG CCGATACTAT GTTAGAGTAC TTAAAAAGCC AGAAATAA
|
Protein sequence | MITHVPDVTF KTRVRDESIG GENPFKWYDL TTDELFANKK VVVFSLPGAF TPTCSTSHLP RYEELYNEFK ALGVDEVVCV SVNDAFVMYQ WGLKQGRENV FLLPDGNGEF TRKMGMLVDK SNLGFGMRSW RYSMYVDNKE IKQVFMEPGF DDNCPTDPFE VSDADTMLEY LKSQK
|
| |