Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1347 |
Symbol | |
ID | 5205134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1643318 |
End bp | 1644286 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599565 |
Product | hypothetical protein |
Protein accession | YP_001280242 |
Protein GI | 148653149 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000342726 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000821866 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATAACT TACCTCAACA AACACAACCA TCTGGTTTTA TCAATCCTCA AAACTATCAA GAAGCCTGGC AGTTTAGCGA AATGTTAGCA GCATCTGAGA TGGTGCCCAA GAACTTCAAA GGTAAACCGG CTGATATTTT AATCGCCATG CAAATGGGTA GCGAGATTGG CTTAAAACCC CTGCAATCAC TGCAAAATAT CGCTGTAGTT AATGGCCGTC CTACCATCTG GGGTGACGCG GTTGTAGCTA TCTGCCAAAG CTCAGGGATG CTTGAAGATA TTACTGAAGA AGTCACCGAT GAATATGCAA CGGTCACTGT TAAGCGAATT GGCCAAGAGC CACACAGCGT AACTTTTAGT ATGCAAGACG CTAAAAAAGC AGGGTTGGCT GGTAAACAAG GTCCTTGGAC TCAGTACCCC AAGCGCATGA TGAAAAACCG CGCACGTGCT TACGCTCTAC GTGACAAGTT CGCTGACGTG CTAAGTGGCT TTGGGATCAC TGAAGAAGAG AAAGACCGTG TGATTGACGT TACTCCAGCC AAGCCGGGTA AGACCAAAAA CGCCGGTGCC TCTGCCCTAC TTGAGCGTGT CAAAGCAAAG GCGGCAACAG TTGAAGCACC GGCTATTGAG TATTTTGATA CCACCCAATT AATTAACTTC ATTGCCCAAG CTGAAAACTT AGAGCAAATT AATGGTATCG GCAAAGAAAT TAAAGCCATG TCTGAAAATG CAGATATCAA CATCAAAAAT TATGACTTGG CAGCTCTACG TAAAACTTGG AAAGATAAAA AGCTGGAGCT TGAGTACGCC AATCTTATGA ATAACATCAA ATCGTGCCAG TCATTAGATG ATATTGAGCG TATGCGCGGT GTGATTGAAG ACAAGTCTGG TGACTTTGCA CAGCCTGATT TACAGCTACT TAGCGACACG CTAGATATGG TTGCTGAAGA AATTGGTGCT GAGGGTTAA
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Protein sequence | MNNLPQQTQP SGFINPQNYQ EAWQFSEMLA ASEMVPKNFK GKPADILIAM QMGSEIGLKP LQSLQNIAVV NGRPTIWGDA VVAICQSSGM LEDITEEVTD EYATVTVKRI GQEPHSVTFS MQDAKKAGLA GKQGPWTQYP KRMMKNRARA YALRDKFADV LSGFGITEEE KDRVIDVTPA KPGKTKNAGA SALLERVKAK AATVEAPAIE YFDTTQLINF IAQAENLEQI NGIGKEIKAM SENADINIKN YDLAALRKTW KDKKLELEYA NLMNNIKSCQ SLDDIERMRG VIEDKSGDFA QPDLQLLSDT LDMVAEEIGA EG
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