Gene PsycPRwf_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1342 
Symbol 
ID5205367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1638533 
End bp1639057 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content36% 
IMG OID640599560 
Producthypothetical protein 
Protein accessionYP_001280237 
Protein GI148653144 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00231374 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTAAGA GGGCTGAGCA AAGTCTAGAG AAAACTATAT TTAACAGTCG CTGGCTGTTA 
GCTCCATTTT ATTTAGGGCT TATAATAGGA ATTATTCTTC TTTTCATAAA ATTTTTTCAA
AAAATCTGGT ATATCACTAC GCATGTATTC ACTGCTAGCG AAGCCGATGT AATTGTTGGC
ACGTTAGTTT TAATAGATAT AGCACTAGTG GCCAGCTTAT TACTTATTAT TGTATTTAGT
GGGTACGAAA TATTTGTTTC AAAAATTGAT ACAGGAGACC ATGAAGATCG TCCGGGCTGG
ATGGGTACCA TTGATTTCTC TGGCTTAAAA CTAAAGGTCA TTAGTGCCAT TGTTGCTATT
TCTGCAATTG ACCTTCTCAA ATCATTTATG AATATACCTG ACCAGATAAG TGATGGGGAC
GCTAATAGAC TAATGTGGAA GGTCGTTATA CATATGACAT TCGTTTTATC TGGACTATTG
TTTGCTTTAA TGGATAAGAT TGCTGGTGAT ACTAAAAAGC ACTAA
 
Protein sequence
MPKRAEQSLE KTIFNSRWLL APFYLGLIIG IILLFIKFFQ KIWYITTHVF TASEADVIVG 
TLVLIDIALV ASLLLIIVFS GYEIFVSKID TGDHEDRPGW MGTIDFSGLK LKVISAIVAI
SAIDLLKSFM NIPDQISDGD ANRLMWKVVI HMTFVLSGLL FALMDKIAGD TKKH