Gene PsycPRwf_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1340 
Symbol 
ID5205365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1636655 
End bp1637497 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content35% 
IMG OID640599558 
Producthypothetical protein 
Protein accessionYP_001280235 
Protein GI148653142 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00251754 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATAAAA TGATATTAAA GGAAGTAATG CCCAATGATG TAGAGCGTAT TACTCGTACA 
GTGAAGAATG ATCCTATGAG CAATGTTCTT ATGGGGAGTT TATTGCTAAA TAATAAGTCT
CAATCTGTAT ACTTTAAATT CTATCCTATA CAATTGGGCA ATAGAGGGCT ATTAAACGAG
GTTATAGGTT ATCTATACGG AACGGTATCT AATGTTTCTC AGCCTGAATT TGCAGGAGTA
GCGTTTGTAT CAACCGATAT GCTTAACCCT TTTTATAACT CACTAACTGA AGATTTAAAA
AAAAGCGTTC AACAAGAGAA GCATCTACCT GCGTTTTTCA CTAAAAATGT TCCTGGATAT
CACTATAAAT ACAATGTGCT AACCGACAAA CAGCGCAAAG AAATATTAAA ATGGTCAGAC
TTTAATAAGG CAATTGTGTT TGATGAGATT ATCGCAAATA CTGATCGTTA TCCTAGGAAT
CTTATTCAAA CAGGAAGCAA TCAATTTTGT TTGATTGATA ATGGATTCCT AGCTACTGAA
AACAATAGCC ATCCGAACTG GAAATCTTCT CAGTTATATC GTGAAAGGAA CTATGAGAAC
CAGCTTGCTC TAATCAACCA AGCTGAAATA CAAGCAGATG CTCGTAAAGG AAATAGGATG
ATTGCTGCTG CAGACGAGTA CTTTCTTTCC TACAATCACC TCCTGCCTGA GATAGAGTAT
TGGATAGACC TATTAATCGA GGATGCTGAT AAACAAGATT GGCGAGAGTT TTTAGATTTT
TTAGAGTATA GAACAAATAG TATTAATAGC TTATTAAGTA ACCGTTATGG ATTACTGGGG
TAA
 
Protein sequence
MDKMILKEVM PNDVERITRT VKNDPMSNVL MGSLLLNNKS QSVYFKFYPI QLGNRGLLNE 
VIGYLYGTVS NVSQPEFAGV AFVSTDMLNP FYNSLTEDLK KSVQQEKHLP AFFTKNVPGY
HYKYNVLTDK QRKEILKWSD FNKAIVFDEI IANTDRYPRN LIQTGSNQFC LIDNGFLATE
NNSHPNWKSS QLYRERNYEN QLALINQAEI QADARKGNRM IAAADEYFLS YNHLLPEIEY
WIDLLIEDAD KQDWREFLDF LEYRTNSINS LLSNRYGLLG