| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1322 |
|---|
| Symbol | |
|---|
| ID | 5205719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1619547 |
|---|
| End bp | 1620245 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640599540 |
|---|
| Product | LrgB family protein |
|---|
| Protein accession | YP_001280217 |
|---|
| Protein GI | 148653124 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1346] Putative effector of murein hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTT GGTCAATCCT TTGTCTAATT TGGACATTAG CTGCTTATTA TATAGCCAAA
GTAATTTATT TACGCCATCG AAAATCTTGG CTAAATCCTG CTATCACGGT TCCAGTAATA
ACGCTTTCAT TAATGATTTT TTTTAATATC TCTTATGATA CATATTGGGA GGATACAGCT
TGGATTGTAC AGTTACTTGT CCCCGCAACG GTTGCTTTTG CTATACCTAT TTACGAGTAT
CGTCGTTTAA TACGTCAAAA TGCTTTGGCT TTGGGCGCTT CTATAATTGT TGGAATGGTG
GTGGGAGTCT TAAGCATATA TATATTTGCC GGCTTATTCA ATTTTGATGA GACCTTGACC
TATAGCTTGA TGGCCCGTTC AATATCGACA CCATTTGCGT TAGACTTATC TGAAAAAATT
CACGGATCTT CCTCTTTAGT TTCATTATTT ACTTTGATTA CAGGGATGGT GGGAATGATT
TTAGGGGATA TGATTTTGAC TTTTTTCCGT ATTCGCTCCC ATTTTGCAAA TGGAATCGCA
TTTGGTAATG CATCACACGG TTTTGGTACA GCCCGTGCAA GTCAGCGCAA TGAGGATGAA
GGCGTTATAG CAAGTTTAAC AATGATTTTA GCCGGATTAT TTATGGTGCT CGTAGGTCCT
TCATTAATAC ATAGCGTAAT GTTATTTGGG CAAATTTAA
|
|---|
| Protein sequence | MNTWSILCLI WTLAAYYIAK VIYLRHRKSW LNPAITVPVI TLSLMIFFNI SYDTYWEDTA
WIVQLLVPAT VAFAIPIYEY RRLIRQNALA LGASIIVGMV VGVLSIYIFA GLFNFDETLT
YSLMARSIST PFALDLSEKI HGSSSLVSLF TLITGMVGMI LGDMILTFFR IRSHFANGIA
FGNASHGFGT ARASQRNEDE GVIASLTMIL AGLFMVLVGP SLIHSVMLFG QI
|
|---|
| |